Detail information of GWHGAAEX007718/evm.TU.scaffold_201.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743854916|ref|XP_010941132.1|2.04E-162PREDICTED: scarecrow-like protein 27 [Elaeis guineensis]
Swissprottr|O81316|SCL6_ARATH1.00E-97Scarecrow-like protein 6
trEMBLtr|M0TPG9|M0TPG9_MUSAM2.00E-178Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P11160_001}
TAIRAT4G001503.00E-97GRAS family transcription factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000208956852958756-
Transcript Sequence

Network for GWHGAAEX007718

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.13GRAS2596336.10E-82
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.090
SRR2545915Juvenile tuber14.730
SRP108465SRR5643513five period of Gastrodia elata27.130
SRR5643514five period of Gastrodia elata31.270
SRR5643515five period of Gastrodia elata20.530
SRR5643524five period of Gastrodia elata26.090
SRR5643525five period of Gastrodia elata42.110
SRR5643528five period of Gastrodia elata28.120
SRR5643658five period of Gastrodia elata51.210
SRR5643659five period of Gastrodia elata9.880
SRR5643660five period of Gastrodia elata9.340
SRR5643661five period of Gastrodia elata8.910
SRR5643662five period of Gastrodia elata7.800
SRR5643663five period of Gastrodia elata9.050
SRR5643664five period of Gastrodia elata7.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.360
SRR6049655Rhizomagastrodiae_C368-T10_good_135.360
SRR6049656Rhizomagastrodiae_C368-T07_good_131.640
SRR6049657Rhizomagastrodiae_C368-T07_good_123.980
SRR6049658Rhizomagastrodiae_C368-T04_good_133.960
SRR6049659Rhizomagastrodiae_C368-T04_good_138.270
SRR6049660Rhizomagastrodiae_C368-T01_good_136.440
SRR6049661Rhizomagastrodiae_C368-T04_good_134.090
SRR6049662Rhizomagastrodiae_C368-T01_good_156.650
SRR6049663Rhizomagastrodiae_C368-T01_good_151.530
SRR6049664Rhizomagastrodiae_C368-T10_good_133.200
SRR6049665Rhizomagastrodiae_C368-T10_good_133.200
SRP279888GastroGastrodia elata tuber 11.82
JuvenJuvenile tuber18.36
Mother_GastroMother tuber of Gastrodia elata 20.60
Mother_JuvenMother tuber of Juvenile 13.32