Detail information of GWHGAAEX007725/evm.TU.scaffold_201.52
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|145299062|ref|YP_001141903.1| | 9.00E-57 | adenine phosphoribosyltransferase [Aeromonas salmonicida subsp. salmonicida A449] |
| KOG | KOG1712 | 6.00E-93 | Adenine phosphoribosyl transferases |
| nr | gi|672127075|ref|XP_008786997.1| | 6.92E-107 | PREDICTED: adenine phosphoribosyltransferase 1 [Phoenix dactylifera] |
| Swissprot | tr|Q9SU38|APT4_ARATH | 2.00E-93 | Adenine phosphoribosyltransferase 4 |
| trEMBL | tr|M0TPH3|M0TPH3_MUSAM | 5.00E-103 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P11200_001} |
| TAIR | AT4G12440 | 6.00E-93 | adenine phosphoribosyl transferase 4 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000208 | 1265761 | 1274400 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007725
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00156.26 | Pribosyltran | 53 | 167 | 1.00E-17 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00759 | APRT, apt | Metabolic pathways | map01100 |
| Purine metabolism | map00230 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009116 | Biological Process | nucleoside metabolic process |
| GO:0006168 | Biological Process | adenine salvage |
| GO:0003999 | Molecular Function | adenine phosphoribosyltransferase activity |
| GO:0005737 | Cellular Component | cytoplasm |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.100 |
| SRR2545915 | Juvenile tuber | 0.450 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1.170 |
| SRR5643514 | five period of Gastrodia elata | 0.800 | |
| SRR5643515 | five period of Gastrodia elata | 0.500 | |
| SRR5643524 | five period of Gastrodia elata | 0.610 | |
| SRR5643525 | five period of Gastrodia elata | 0.210 | |
| SRR5643528 | five period of Gastrodia elata | 0.110 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 0.170 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.100 | |
| SRR5643662 | five period of Gastrodia elata | 0.100 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 0.180 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.100 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.660 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.240 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.660 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.280 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.330 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.080 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.400 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 2.770 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.590 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.970 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.970 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.16 |
| Juven | Juvenile tuber | 0.12 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.00 | |
| Mother_Juven | Mother tuber of Juvenile | 0.04 |