Detail information of GWHGAAEX007731/evm.TU.scaffold_201.58


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672127103|ref|XP_008787013.1|2.74E-104PREDICTED: protein YABBY 4-like [Phoenix dactylifera]
Swissprottr|O22152|YAB1_ARATH2.00E-79Axial regulator YABBY 1
trEMBLtr|M0TPL1|M0TPL1_MUSAM1.00E-102Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P11580_001}
TAIRAT2G451906.00E-79Plant-specific transcription factor YABBY family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000020813605361362660-
Transcript Sequence

Network for GWHGAAEX007731

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04690.12YABBY171845.00E-71
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-YABBY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007275Biological Processmulticellular organism development

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.300
SRR2545915Juvenile tuber3.100
SRP108465SRR5643513five period of Gastrodia elata12.980
SRR5643514five period of Gastrodia elata13.760
SRR5643515five period of Gastrodia elata5.900
SRR5643524five period of Gastrodia elata13.770
SRR5643525five period of Gastrodia elata3.760
SRR5643528five period of Gastrodia elata0.160
SRR5643658five period of Gastrodia elata0.060
SRR5643659five period of Gastrodia elata3.570
SRR5643660five period of Gastrodia elata0.560
SRR5643661five period of Gastrodia elata0.640
SRR5643662five period of Gastrodia elata0.140
SRR5643663five period of Gastrodia elata0.160
SRR5643664five period of Gastrodia elata0.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.240
SRR6049655Rhizomagastrodiae_C368-T10_good_111.640
SRR6049656Rhizomagastrodiae_C368-T07_good_17.360
SRR6049657Rhizomagastrodiae_C368-T07_good_14.220
SRR6049658Rhizomagastrodiae_C368-T04_good_14.800
SRR6049659Rhizomagastrodiae_C368-T04_good_11.490
SRR6049660Rhizomagastrodiae_C368-T01_good_12.560
SRR6049661Rhizomagastrodiae_C368-T04_good_19.160
SRR6049662Rhizomagastrodiae_C368-T01_good_112.070
SRR6049663Rhizomagastrodiae_C368-T01_good_14.760
SRR6049664Rhizomagastrodiae_C368-T10_good_16.760
SRR6049665Rhizomagastrodiae_C368-T10_good_16.760
SRP279888GastroGastrodia elata tuber 0.26
JuvenJuvenile tuber3.26
Mother_GastroMother tuber of Gastrodia elata 3.74
Mother_JuvenMother tuber of Juvenile 4.29