Detail information of GWHGAAEX007763/evm.TU.scaffold_203.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00282.00E-25Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein
nrgi|672187275|ref|XP_008813299.1|6.81E-33PREDICTED: calcium-binding protein PBP1-like [Phoenix dactylifera]
Swissprottr|Q9ZPX9|KIC_ARATH3.00E-26Calcium-binding protein KIC
trEMBLtr|M0U4Q9|M0U4Q9_MUSAM7.00E-32Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P30020_001}
TAIRAT2G466002.00E-25Calcium-binding EF-hand family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000210485216486867+
Transcript Sequence

Network for GWHGAAEX007763

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module5

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13833.5EF-hand_842949.50E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.280
SRR2545915Juvenile tuber0.590
SRP108465SRR5643513five period of Gastrodia elata14.060
SRR5643514five period of Gastrodia elata48.170
SRR5643515five period of Gastrodia elata23.880
SRR5643524five period of Gastrodia elata39.860
SRR5643525five period of Gastrodia elata0.610
SRR5643528five period of Gastrodia elata0.990
SRR5643658five period of Gastrodia elata0.450
SRR5643659five period of Gastrodia elata1.800
SRR5643660five period of Gastrodia elata0.700
SRR5643661five period of Gastrodia elata0.930
SRR5643662five period of Gastrodia elata1.390
SRR5643663five period of Gastrodia elata0.870
SRR5643664five period of Gastrodia elata1.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.710
SRR6049655Rhizomagastrodiae_C368-T10_good_122.080
SRR6049656Rhizomagastrodiae_C368-T07_good_117.040
SRR6049657Rhizomagastrodiae_C368-T07_good_17.900
SRR6049658Rhizomagastrodiae_C368-T04_good_114.690
SRR6049659Rhizomagastrodiae_C368-T04_good_110.760
SRR6049660Rhizomagastrodiae_C368-T01_good_17.620
SRR6049661Rhizomagastrodiae_C368-T04_good_18.590
SRR6049662Rhizomagastrodiae_C368-T01_good_112.080
SRR6049663Rhizomagastrodiae_C368-T01_good_112.720
SRR6049664Rhizomagastrodiae_C368-T10_good_127.730
SRR6049665Rhizomagastrodiae_C368-T10_good_127.730
SRP279888GastroGastrodia elata tuber 0.29
JuvenJuvenile tuber0.16
Mother_GastroMother tuber of Gastrodia elata 4.76
Mother_JuvenMother tuber of Juvenile 0.36