Detail information of GWHGAAEX007764/evm.TU.scaffold_203.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30394.00E-163Uncharacterized conserved protein
nrgi|694309505|ref|XP_009372652.1|0PREDICTED: nitric oxide synthase-interacting protein [Pyrus x bretschneideri]
trEMBLtr|F6I745|F6I745_VITVI1.00E-179Putative uncharacterized protein {ECO:0000313|EMBL:CCB62763.1}
TAIRAT1G616204.00E-163phosphoinositide binding

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000210495334504135+
Transcript Sequence

Network for GWHGAAEX007764

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15906.4zf-NOSIP5755.60E-16
PF04641.11Rtf21872685.70E-08
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0061630Molecular Functionubiquitin protein ligase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.220
SRR2545915Juvenile tuber23.120
SRP108465SRR5643513five period of Gastrodia elata20.850
SRR5643514five period of Gastrodia elata23.450
SRR5643515five period of Gastrodia elata21.520
SRR5643524five period of Gastrodia elata21.530
SRR5643525five period of Gastrodia elata26.040
SRR5643528five period of Gastrodia elata26.040
SRR5643658five period of Gastrodia elata32.170
SRR5643659five period of Gastrodia elata33.430
SRR5643660five period of Gastrodia elata28.940
SRR5643661five period of Gastrodia elata32.710
SRR5643662five period of Gastrodia elata27.050
SRR5643663five period of Gastrodia elata28.030
SRR5643664five period of Gastrodia elata22.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.360
SRR6049655Rhizomagastrodiae_C368-T10_good_126.100
SRR6049656Rhizomagastrodiae_C368-T07_good_124.830
SRR6049657Rhizomagastrodiae_C368-T07_good_122.550
SRR6049658Rhizomagastrodiae_C368-T04_good_121.400
SRR6049659Rhizomagastrodiae_C368-T04_good_120.460
SRR6049660Rhizomagastrodiae_C368-T01_good_123.570
SRR6049661Rhizomagastrodiae_C368-T04_good_120.570
SRR6049662Rhizomagastrodiae_C368-T01_good_125.240
SRR6049663Rhizomagastrodiae_C368-T01_good_124.190
SRR6049664Rhizomagastrodiae_C368-T10_good_127.820
SRR6049665Rhizomagastrodiae_C368-T10_good_127.820
SRP279888GastroGastrodia elata tuber 33.86
JuvenJuvenile tuber29.64
Mother_GastroMother tuber of Gastrodia elata 18.68
Mother_JuvenMother tuber of Juvenile 23.27