Detail information of GWHGAAEX007773/evm.TU.scaffold_203.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672129461|ref|XP_008788240.1|0PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Phoenix dactylifera]
Swissprottr|Q9SSQ4|FRS6_ARATH8.00E-121Protein FAR1-RELATED SEQUENCE 6
trEMBLtr|I1GKZ2|I1GKZ2_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G01990.2}
TAIRAT1G525203.00E-120FAR1-related sequence 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000210951182961974-
Transcript Sequence

Network for GWHGAAEX007773

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03101.14FAR11131959.40E-17
PF10551.8MULE2983918.40E-23
PF04434.16SWIM5916171.30E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyFAR1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.120
SRR2545915Juvenile tuber22.080
SRP108465SRR5643513five period of Gastrodia elata11.280
SRR5643514five period of Gastrodia elata12.150
SRR5643515five period of Gastrodia elata9.760
SRR5643524five period of Gastrodia elata12.050
SRR5643525five period of Gastrodia elata11.400
SRR5643528five period of Gastrodia elata10.650
SRR5643658five period of Gastrodia elata12.140
SRR5643659five period of Gastrodia elata15.080
SRR5643660five period of Gastrodia elata16.360
SRR5643661five period of Gastrodia elata15.160
SRR5643662five period of Gastrodia elata15.110
SRR5643663five period of Gastrodia elata15.180
SRR5643664five period of Gastrodia elata14.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.420
SRR6049655Rhizomagastrodiae_C368-T10_good_111.650
SRR6049656Rhizomagastrodiae_C368-T07_good_114.680
SRR6049657Rhizomagastrodiae_C368-T07_good_115.220
SRR6049658Rhizomagastrodiae_C368-T04_good_114.560
SRR6049659Rhizomagastrodiae_C368-T04_good_116.260
SRR6049660Rhizomagastrodiae_C368-T01_good_115.110
SRR6049661Rhizomagastrodiae_C368-T04_good_115.340
SRR6049662Rhizomagastrodiae_C368-T01_good_115.050
SRR6049663Rhizomagastrodiae_C368-T01_good_116.500
SRR6049664Rhizomagastrodiae_C368-T10_good_111.970
SRR6049665Rhizomagastrodiae_C368-T10_good_111.970
SRP279888GastroGastrodia elata tuber 19.89
JuvenJuvenile tuber20.46
Mother_GastroMother tuber of Gastrodia elata 13.68
Mother_JuvenMother tuber of Juvenile 20.05