Detail information of GWHGAAEX007792/evm.TU.scaffold_204.24


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|657979235|ref|XP_008381576.1|1.74E-06PREDICTED: nuclear cap-binding protein subunit 2-like [Malus domestica]
trEMBLtr|U5FMG8|U5FMG8_POPTR2.00E-06Uncharacterized protein {ECO:0000313|EMBL:ERP50542.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019911288601130323+
Transcript Sequence

Network for GWHGAAEX007792

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.150
SRR2545915Juvenile tuber42.650
SRP108465SRR5643513five period of Gastrodia elata15.150
SRR5643514five period of Gastrodia elata16.880
SRR5643515five period of Gastrodia elata16.880
SRR5643524five period of Gastrodia elata22.500
SRR5643525five period of Gastrodia elata35.690
SRR5643528five period of Gastrodia elata26.910
SRR5643658five period of Gastrodia elata25.940
SRR5643659five period of Gastrodia elata29.100
SRR5643660five period of Gastrodia elata23.040
SRR5643661five period of Gastrodia elata23.930
SRR5643662five period of Gastrodia elata24.340
SRR5643663five period of Gastrodia elata32.740
SRR5643664five period of Gastrodia elata22.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.370
SRR6049655Rhizomagastrodiae_C368-T10_good_134.960
SRR6049656Rhizomagastrodiae_C368-T07_good_138.240
SRR6049657Rhizomagastrodiae_C368-T07_good_138.670
SRR6049658Rhizomagastrodiae_C368-T04_good_141.160
SRR6049659Rhizomagastrodiae_C368-T04_good_142.440
SRR6049660Rhizomagastrodiae_C368-T01_good_138.750
SRR6049661Rhizomagastrodiae_C368-T04_good_136.230
SRR6049662Rhizomagastrodiae_C368-T01_good_142.560
SRR6049663Rhizomagastrodiae_C368-T01_good_141.030
SRR6049664Rhizomagastrodiae_C368-T10_good_150.270
SRR6049665Rhizomagastrodiae_C368-T10_good_150.270
SRP279888GastroGastrodia elata tuber 50.62
JuvenJuvenile tuber105.92
Mother_GastroMother tuber of Gastrodia elata 81.65
Mother_JuvenMother tuber of Juvenile 70.72