Detail information of GWHGAAEX007798/evm.TU.scaffold_205.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743838440|ref|XP_010936702.1|6.38E-68PREDICTED: zinc-finger homeodomain protein 6-like [Elaeis guineensis]
Swissprottr|B8AX53|ZHD6_ORYSI3.00E-50Zinc-finger homeodomain protein 6
trEMBLtr|A0A068U322|A0A068U322_COFCA3.00E-56Coffea canephora
TAIRAT2G025403.00E-47homeobox protein 21

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000002182664627594-
Transcript Sequence

Network for GWHGAAEX007798

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04770.11ZF-HD_dimer761221.40E-23
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors Familyzf-HD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.170
SRR2545915Juvenile tuber14.720
SRP108465SRR5643513five period of Gastrodia elata15.130
SRR5643514five period of Gastrodia elata17.920
SRR5643515five period of Gastrodia elata15.890
SRR5643524five period of Gastrodia elata15.740
SRR5643525five period of Gastrodia elata0.860
SRR5643528five period of Gastrodia elata0.190
SRR5643658five period of Gastrodia elata0.730
SRR5643659five period of Gastrodia elata23.560
SRR5643660five period of Gastrodia elata11.070
SRR5643661five period of Gastrodia elata19.530
SRR5643662five period of Gastrodia elata4.480
SRR5643663five period of Gastrodia elata4.000
SRR5643664five period of Gastrodia elata9.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.510
SRR6049655Rhizomagastrodiae_C368-T10_good_124.010
SRR6049656Rhizomagastrodiae_C368-T07_good_113.900
SRR6049657Rhizomagastrodiae_C368-T07_good_116.520
SRR6049658Rhizomagastrodiae_C368-T04_good_118.420
SRR6049659Rhizomagastrodiae_C368-T04_good_113.260
SRR6049660Rhizomagastrodiae_C368-T01_good_121.690
SRR6049661Rhizomagastrodiae_C368-T04_good_129.620
SRR6049662Rhizomagastrodiae_C368-T01_good_124.640
SRR6049663Rhizomagastrodiae_C368-T01_good_115.940
SRR6049664Rhizomagastrodiae_C368-T10_good_19.030
SRR6049665Rhizomagastrodiae_C368-T10_good_19.030
SRP279888GastroGastrodia elata tuber 2.55
JuvenJuvenile tuber6.85
Mother_GastroMother tuber of Gastrodia elata 7.76
Mother_JuvenMother tuber of Juvenile 5.88