Detail information of GWHGAAEX007800/evm.TU.scaffold_205.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|116622785|ref|YP_824941.1|4.00E-18FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Candidatus Solibacter usitatus Ellin6076]
KOGKOG13365.00E-78Monodehydroascorbate/ferredoxin reductase
nrgi|720083977|ref|XP_010243060.1|3.17E-88PREDICTED: probable monodehydroascorbate reductase, cytoplasmic isoform 2 [Nelumbo nucifera]
Swissprottr|Q9LK94|MDAR2_ARATH2.00E-78Probable monodehydroascorbate reductase, cytoplasmic isoform 2
trEMBLtr|A5BNW8|A5BNW8_VITVI1.00E-84Putative uncharacterized protein {ECO:0000313|EMBL:CAN77104.1}
trEMBLtr|A5BNW8|A5BNW8_VITVI1.00E-26Putative uncharacterized protein {ECO:0000313|EMBL:CAN77104.1}
TAIRAT3G278205.00E-78monodehydroascorbate reductase 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000218133144170193+
Transcript Sequence

Network for GWHGAAEX007800

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07992.13Pyr_redox_21181881.40E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08232E1.6.5.4 Metabolic pathways map01100
Ascorbate and aldarate metabolismmap00053

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity
GO:0050660Molecular Functionflavin adenine dinucleotide binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.590
SRR2545915Juvenile tuber2.800
SRP108465SRR5643513five period of Gastrodia elata0.960
SRR5643514five period of Gastrodia elata0.400
SRR5643515five period of Gastrodia elata0.790
SRR5643524five period of Gastrodia elata0.170
SRR5643525five period of Gastrodia elata0.740
SRR5643528five period of Gastrodia elata0.640
SRR5643658five period of Gastrodia elata1.380
SRR5643659five period of Gastrodia elata0.430
SRR5643660five period of Gastrodia elata0.760
SRR5643661five period of Gastrodia elata0.580
SRR5643662five period of Gastrodia elata0.570
SRR5643663five period of Gastrodia elata0.220
SRR5643664five period of Gastrodia elata0.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.770
SRR6049655Rhizomagastrodiae_C368-T10_good_10.110
SRR6049656Rhizomagastrodiae_C368-T07_good_11.120
SRR6049657Rhizomagastrodiae_C368-T07_good_11.230
SRR6049658Rhizomagastrodiae_C368-T04_good_12.220
SRR6049659Rhizomagastrodiae_C368-T04_good_10.980
SRR6049660Rhizomagastrodiae_C368-T01_good_11.290
SRR6049661Rhizomagastrodiae_C368-T04_good_10.790
SRR6049662Rhizomagastrodiae_C368-T01_good_10.600
SRR6049663Rhizomagastrodiae_C368-T01_good_10.950
SRR6049664Rhizomagastrodiae_C368-T10_good_10.820
SRR6049665Rhizomagastrodiae_C368-T10_good_10.820
SRP279888GastroGastrodia elata tuber 0.59
JuvenJuvenile tuber0.49
Mother_GastroMother tuber of Gastrodia elata 1.03
Mother_JuvenMother tuber of Juvenile 0.86