Detail information of GWHGAAEX007803/evm.TU.scaffold_205.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|511060256|ref|YP_008072141.1|3.00E-10elongation factor 1-alpha [Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1]
KOGKOG00526.00E-22Translation elongation factor EF-1 alpha/Tu
nrgi|63192026|gb|AAY34910.1|3.36E-23elongation factor 1 alpha [Prunus armeniaca]
Swissprottr|P34823|EF1A2_DAUCA9.00E-24Elongation factor 1-alpha
trEMBLtr|Q1X8N4|Q1X8N4_PRUAR1.00E-23Elongation factor 1 alpha {ECO:0000313|EMBL:AAY34910.1} (Fragment)
TAIRAT5G603906.00E-22GTP binding Elongation factor Tu family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000218308403308627+
Transcript Sequence

Network for GWHGAAEX007803

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03143.16GTP_EFTU_D318571.30E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03231EEF1A RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.260
SRR2545915Juvenile tuber11.590
SRP108465SRR5643513five period of Gastrodia elata71.680
SRR5643514five period of Gastrodia elata105.730
SRR5643515five period of Gastrodia elata45.510
SRR5643524five period of Gastrodia elata96.680
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata3.430
SRR5643659five period of Gastrodia elata211.130
SRR5643660five period of Gastrodia elata201.160
SRR5643661five period of Gastrodia elata140.260
SRR5643662five period of Gastrodia elata218.660
SRR5643663five period of Gastrodia elata100.910
SRR5643664five period of Gastrodia elata230.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_149.180
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_147.000
SRR6049657Rhizomagastrodiae_C368-T07_good_160.110
SRR6049658Rhizomagastrodiae_C368-T04_good_114.790
SRR6049659Rhizomagastrodiae_C368-T04_good_117.940
SRR6049660Rhizomagastrodiae_C368-T01_good_118.050
SRR6049661Rhizomagastrodiae_C368-T04_good_113.240
SRR6049662Rhizomagastrodiae_C368-T01_good_16.700
SRR6049663Rhizomagastrodiae_C368-T01_good_16.570
SRR6049664Rhizomagastrodiae_C368-T10_good_153.200
SRR6049665Rhizomagastrodiae_C368-T10_good_153.200
SRP279888GastroGastrodia elata tuber 89.82
JuvenJuvenile tuber74.40
Mother_GastroMother tuber of Gastrodia elata 13.53
Mother_JuvenMother tuber of Juvenile 61.14