Detail information of GWHGAAEX007808/evm.TU.scaffold_205.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695066982|ref|XP_009380396.1|1.36E-145PREDICTED: L-tryptophan--pyruvate aminotransferase 1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q94A02|TAR2_ARATH5.00E-119Tryptophan aminotransferase-related protein 2
trEMBLtr|M0SGD9|M0SGD9_MUSAM4.00E-144Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P20730_001}
TAIRAT4G246702.00E-115tryptophan aminotransferase related 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000218379834394185+
Transcript Sequence

Network for GWHGAAEX007808

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04864.12Alliinase_C454113.20E-125
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K16903TAA1 Metabolic pathways map01100
Tryptophan metabolismmap00380

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity
GO:0016846Molecular Functioncarbon-sulfur lyase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.550
SRR5643514five period of Gastrodia elata0.360
SRR5643515five period of Gastrodia elata0.340
SRR5643524five period of Gastrodia elata0.550
SRR5643525five period of Gastrodia elata0.530
SRR5643528five period of Gastrodia elata0.860
SRR5643658five period of Gastrodia elata0.740
SRR5643659five period of Gastrodia elata0.400
SRR5643660five period of Gastrodia elata0.110
SRR5643661five period of Gastrodia elata0.220
SRR5643662five period of Gastrodia elata0.270
SRR5643663five period of Gastrodia elata0.290
SRR5643664five period of Gastrodia elata0.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.520
SRR6049655Rhizomagastrodiae_C368-T10_good_10.300
SRR6049656Rhizomagastrodiae_C368-T07_good_10.040
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.050
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.440
SRR6049661Rhizomagastrodiae_C368-T04_good_10.050
SRR6049662Rhizomagastrodiae_C368-T01_good_10.490
SRR6049663Rhizomagastrodiae_C368-T01_good_10.120
SRR6049664Rhizomagastrodiae_C368-T10_good_10.100
SRR6049665Rhizomagastrodiae_C368-T10_good_10.100
SRP279888GastroGastrodia elata tuber 0.14
JuvenJuvenile tuber0.23
Mother_GastroMother tuber of Gastrodia elata 0.27
Mother_JuvenMother tuber of Juvenile 0.39