Gene detail

Detail information of GWHGAAEX007809/evm.TU.scaffold_205.22

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1778	0	CREB binding protein/P300 and related TAZ Zn-finger proteins
nr	gi\|672118401\|ref\|XP_008782409.1\|	0	PREDICTED: histone acetyltransferase HAC1-like isoform X2 [Phoenix dactylifera]
Swissprot	tr\|Q9C5X9\|HAC1_ARATH	0	Histone acetyltransferase HAC1
trEMBL	tr\|M0T5I2\|M0T5I2_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P09330_001}
trEMBL	tr\|M0T5I2\|M0T5I2_MUSAM	9.00E-10	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P09330_001}
TAIR	AT1G79000	0	histone acetyltransferase of the CBP family 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000218	395417	426555	+

Transcript Sequence
>GWHTAAEX007809 CGGAAGGGAAAGGAGGCCCTCGTATCATCCGATTGTTACCGGCTCGAGCTGCGCCATTCTTTCTTTCCTATTGTTTGTTGAGATTCTCTAAATCCGGACGGTGTCCATGTCGGCTCGAAGCAGCGGCTGATTTTCTGTTTAGGGCTCTAAAAATGTCAGGTCGAATTCACCACCAAGATTCCATTTTTCCGGGGCTATCAATTCCTAATTCTATTCGTGAAAAGGAATCATCTCATACAGCATGGAATCCTTTACTGAATGAGACTTCATTAACCAGTTCTATTGGTGACTTTTGCGCTTCACAACGATGCCAACCAACTGAGCGCTGTAGTAATGCTGTTAACTCTGCAAGAAATCTTTGTGAAAAGAACACCAGGTTTCCAAATTGTGCAGGTGCCTATGCAGATGGACATTTTAAGCATGGCAGTGGCTTATCTACTTCTAAGTTCAAAGGCATGCCTGCATCATCAGTTTTTCCCTCTCCCACCAATATTAGTAAGAAATGCTCAATTGTTGGGACGGACAAACTTACAAAAACAGGAGTGCCTATTCCATTGATGAATATGCAGGCCCAGCCTCAGTCTTTAGAGGCATCAGAATGCCCTTCTGGATTGAAACAAAGACATTCTTTCTTAACACTCCCTGAGCAAGCTTATCCCATGCAATATAGGCCTTCTAAGCGAGAAACACAGAACCCATGGCAATTTTCTAATGAATCCTATAGGGATTCAAATCCATTTCAGATCAGTCAAAAGGAGGAACTTCGCCAGCAAGATTGCCTTTTTAATGTACCTCCTGCCATGCCAAATCAGAGAAGTATTTTGAATCTCTTACCTCAGACAAATAAAAAAAAAATGCAATCTCTTATGCCTTCTAAAGTTGATTTGCATGACCCTTCTAAAAGGATAGCTGGTGATTGCAAATCTAAAACTATGAGAAAGGAGGTGATGAAGCTTCAAACTATCTTGTACCTTTGTAAGCATACATTGGGCTGTGCCAAAGGCTGTGATCGCCTTGATTGCAAGGTCATGGAGCAGATTCTTAATCACTGCCTTAGCTGCCACAACAATTCTTGTGAACAACTGTGTGCTCCATACAAGAAATTGCTTGGACATTATGAAGAATGCTGTAAAAGTGGTTGCTCTATATGCCCTCCTGCTAAAATAAAATTGGGTAATCTTCGCATGCTTAATTCTGAAAACACAAAAGTAACTACTTCTTGTCATGCATCAACATGCAAACAGAATCCTGTAAAACTTACGAAGAAAGGTTTTGCATCATCTCCTGGCTCAAGCTGTGCTTCTGAAGTGATAGATATTGACCAAGCAACACATACATGCATTTCACAAAACCAAAAACTGAGAACTTTTGATTCAAATTCTGAACGTTTGAAACTGGTAATTAATCAATCATCAGTCGTTGCAATGGTAGATAATTGGAAGGGTTTTGAGCCTGATGTTAAATGTTTAAAGTATGCTGCCAGATCTCTACTGGAGGTCAATCGTTCTAGTTTAAGAAATGCTGCTGAAGACAGGCTGCAAACCCTGCAAACGTCATCCTCTCTTTCTTGCAAAATTGAAACTGTTAAAGAACTTTCATCTACTGAATGTGCCTATTCGTCTTCCCAGCTAGCTATCTTAGAAAACCAAGATTTTATTACACCTAATAAGGTCTGTATAGAGGAGGGAATGGAACTTGAAGGAAAACCCAATGGAAATCAAGATTCCAATGAAAGATCAAAAACAGAGCCTCACATACAAGGTAAAATGATTAAAACATCAATAAATTACAATGTCAAGGATATGATGGGTGAACACAATTGCTCTGAGAGTATCTCCGATGCGAGTATGATGAAATATTCTGAGCTCAAACTTGAAGGCTTAAACATGGATATAGAAGTTCATCATAATGCTGATTCTATTTCTTCTGAAGTAACTGCAGCCCAAAATGAAAAGCATGTCAAGCAGAAATGTTATGAATCTGAGGCGGAAGTTCATGGAACTTCTCATTCGTTGAGAGGATTAAAGCTAAAAAATGAAACAAAAAAGGCTATTTCATTGCTTAATTTGTTTACACTTGAAGAACTAAGGGAACATATCAGTAGTCTTAGGCAACCTCTCAATCTGGATAAAGTAGCGAAGAAGATGATTTGGCCTGAAACGCAGAAAATTAATCCTTGCAATTTGTGTGGAATGGATAAACTCCTCTTTCAGCCTCCTTTACGATATTGTTCAGCATGTGCGAAGCAAATCAATCCACATGGAATTTACTATTCTATAAAATATTTTGACAACATTGACTCTTCTATGGGAGAATCGTACTCATTTTGTAATCCATGCTATATTGCCTCTAAAGAAAATATCCAATTTGATAAACAAAGCATTCCAAAGGTACATCTAGAGCAGAGAGCTAATTTTACTGAATCAGATGCCATATCTGAAGAGATTGTGCAGTGTCACAAGTGCAAGGAGTGGCAACATGAGATCTGTGCCCTTTTTAATGGAAAGTTGAATAAAGAAAAATCTAGTCAAACTAAATTCACTTGTCCAATTTGTTGCATAAAAGAGGTAGAAAATGGGACATGTGAACCTCTATTGCCTGGCTTTGTTAGAGCAATGGAACTACCAAAAACTAAGCTGAGTGATCATATAGAACAATGGCTTTTTAAGCGACTTGGAGAAGAGAGAATAGAAAGGGCCAATATTTTGGGAAAAAGCATTAATGAGGTTCCCACTGCCAAAAATCTTACCGTTAGAGTAGTTTCATCTGTTGACAAGAAGTTTAAAGTTAAGCCATGTTTTTATGAGATCTTTCAAGAAGAGAAATATCCAGTTGATTTTGCTTACCAATCAAAGGCAGTCATGTTGTTTCAGGTCATCGAAGGTGTTGATGTGCTTATCTTCGCCATGTTTGTCCAAGAATATGGTTCAGATTGTTCCAGACCAAATCGAAGGCAAGTCTGTATCTCATATATTGATTCAGTGAAATACTTCAGGCCTGAAGTAAGGACCGTGTCAGGAGAAGCTCTGCGTACATTTGTTTATCATGAATTCCTGATAGGGTATCTTGATTACTGTAAGAGAAGGTGTTTTACAAGCTGCTACATATGGGCTTGCCCACCATCAAAGAATGATGATTACATTTTGCATTGTCATCCTAAGACTCAAAAGATTCCAAAAGCCGACAAACTACGAGATTGGTACCAGAAAATGATAAAGAAAGCATTACAGGAAAAAATTGTCGTGGAGGTCACTAATCTGTATGACCATTTCTTTGTACAGACAAGTGAATTCAAGGGAAATATAACAGCTGCTCACTTGCCTTACTTTGATAAAGACTACTGGCCAGAAGAAGCAGAGAGTTTGCTCCAGAAATACAGTGGAAACAAGTCTAAACAGACGGAAAAAGTGGCAAAGGCAGTTATTGAGAGAGCACTAAGGGCTGCTAGACGTGATGCTACTTTCATCAAAAATGAGAAGGATGTGCTGCTCATGAACAAGCTTGGAGATACTATTGGGCCTATGAAGGACGACTTTATTATCCTCTATTTGCAACAAACATGTCGGCATTGTCGCAAACCTATCATATTTGGAGGGCGTTGGGTTTGCAATACGTGCAAGAACTTTCAACTCTGTAAAAGGTGTCATAACATCGATGGGAAACTTCGGTATAAAGATAGGCATCCAATGAAAGCAAGGGATAAGCATTCCTTTCACAGAGTTGATTTAGAAAATTTTCTCAGGGATACTACAGATGAGGACGAAACACAGCTGTGCGAAATTTTTAACACTCGATTAGAATTCTTAAATTTCTGTGAGGGTAACCATTACCAATTTGATACCCTCCGGCGGGCTAAACATTCAACAATGATGGTTCTTCATTATCTACACAATCCGGCACCGTTTGATTTTGAATCCTCACACTGTGATGGGATGAATAATGCTTATCAACACAATTCAGATCATCACGAAGAGTGTCATCCTCAACATAGCTTGCTGCTGGACACACAATTGCAAGGCGATAAGGTGCGAGCGCTCATGGTAGCATTGCTGCACGCGTCAAGGTGCGGCGGCCGTGGTTGCACCCTCGCCCATTGCCGGCAGCTGAAAGCCGTCTTCCGTCACGGCGTCGCTTGTAGGGTTCGCAAGAAAGGCGGCTGCGAGCTTTGTGCGAAGATGTGGTGCCTTATTTTCCTTCATTCCCGCTCCTGCCGTCAGCCGGAATGCAGCGTGCCTCGGTGCAAAGATGTAAAAGAGAGATTTGGAGGAACATCGAACGCTCCTCTAATAGGCGGCAAGAGGGATAGGACTGATGACAGAGAGGCCGAGTTGCCGAAAGCTAAAAGGTCTTTTTTGAGGGTGGGTGGTAGCTGATCTGTTCGTGCTGCTACATTATTTTTGATCTGGTTTTCTCCAGCAAGGTGAAGTTGCTCATCATAGTGCAGGGAGAAGGAAGGCTCTGTTGTTTTTAGGAGTTGTTGTAGCTAAGGCGCGGCTGTGCACCTGTAAATATATAGCCAGGTTGACAGGTTTCTTTTGGGTTGTTGATTGGATAAAGGTGAGCGCCCTTAGCCTTAGGGCAGATGATTTTGTTTAGGGCAGGCTGGCCACTATCTGATTCTTTTACAGGCCATTCTTTCAACTGTAAGAAATAAGATTATAGGATTTCCCCCACCGCTCCCTTTCTCATGCTGATCTCTGTGTTTGTTGAAAATCCGCCCTTTTTATTTAATTTTTTTATTTTTAGGGGAGGAAATCTTTGTAGCTTACCTA

Network for GWHGAAEX007809

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02135.15	zf-TAZ	269	333	0.00027
PF08214.10	HAT_KAT11	858	1074	2.60E-30
PF02135.15	zf-TAZ	1294	1363	4.30E-10

Protein Sequence

>GWHPAAEX007809
MSGRIHHQDSIFPGLSIPNSIREKESSHTAWNPLLNETSLTSSIGDFCASQRCQPTERCSNAVNSARNLCEKNTRFPNCAGAYADGHFKHGSGLSTSKFKGMPASSVFPSPTNISKKCSIVGTDKLTKTGVPIPLMNMQAQPQSLEASECPSGLKQRHSFLTLPEQAYPMQYRPSKRETQNPWQFSNESYRDSNPFQISQKEELRQQDCLFNVPPAMPNQRSILNLLPQTNKKKMQSLMPSKVDLHDPSKRIAGDCKSKTMRKEVMKLQTILYLCKHTLGCAKGCDRLDCKVMEQILNHCLSCHNNSCEQLCAPYKKLLGHYEECCKSGCSICPPAKIKLGNLRMLNSENTKVTTSCHASTCKQNPVKLTKKGFASSPGSSCASEVIDIDQATHTCISQNQKLRTFDSNSERLKLVINQSSVVAMVDNWKGFEPDVKCLKYAARSLLEVNRSSLRNAAEDRLQTLQTSSSLSCKIETVKELSSTECAYSSSQLAILENQDFITPNKVCIEEGMELEGKPNGNQDSNERSKTEPHIQGKMIKTSINYNVKDMMGEHNCSESISDASMMKYSELKLEGLNMDIEVHHNADSISSEVTAAQNEKHVKQKCYESEAEVHGTSHSLRGLKLKNETKKAISLLNLFTLEELREHISSLRQPLNLDKVAKKMIWPETQKINPCNLCGMDKLLFQPPLRYCSACAKQINPHGIYYSIKYFDNIDSSMGESYSFCNPCYIASKENIQFDKQSIPKVHLEQRANFTESDAISEEIVQCHKCKEWQHEICALFNGKLNKEKSSQTKFTCPICCIKEVENGTCEPLLPGFVRAMELPKTKLSDHIEQWLFKRLGEERIERANILGKSINEVPTAKNLTVRVVSSVDKKFKVKPCFYEIFQEEKYPVDFAYQSKAVMLFQVIEGVDVLIFAMFVQEYGSDCSRPNRRQVCISYIDSVKYFRPEVRTVSGEALRTFVYHEFLIGYLDYCKRRCFTSCYIWACPPSKNDDYILHCHPKTQKIPKADKLRDWYQKMIKKALQEKIVVEVTNLYDHFFVQTSEFKGNITAAHLPYFDKDYWPEEAESLLQKYSGNKSKQTEKVAKAVIERALRAARRDATFIKNEKDVLLMNKLGDTIGPMKDDFIILYLQQTCRHCRKPIIFGGRWVCNTCKNFQLCKRCHNIDGKLRYKDRHPMKARDKHSFHRVDLENFLRDTTDEDETQLCEIFNTRLEFLNFCEGNHYQFDTLRRAKHSTMMVLHYLHNPAPFDFESSHCDGMNNAYQHNSDHHEECHPQHSLLLDTQLQGDKVRALMVALLHASRCGGRGCTLAHCRQLKAVFRHGVACRVRKKGGCELCAKMWCLIFLHSRSCRQPECSVPRCKDVKERFGGTSNAPLIGGKRDRTDDREAELPKAKRSFLRVGGS

Gene family

Gene family	subfamily
Transcription Factors Family	TAZ

KEGG pathway

KO	Enzyme	pathway	mapID
K04498	EP300, CREBBP, KAT3	Wnt signaling pathway	map04310
		Notch signaling pathway	map04330
		TGF-beta signaling pathway	map04350
		JAK-STAT signaling pathway	map04630
		HIF-1 signaling pathway	map04066
		FoxO signaling pathway	map04068
		cAMP signaling pathway	map04024
		Cell cycle	map04110
		Adherens junction	map04520
		Glucagon signaling pathway	map04922
		Relaxin signaling pathway	map04926
		Thyroid hormone signaling pathway	map04919
		Melanogenesis	map04916
		Long-term potentiation	map04720

Gene Ontology

GO term	Ontology	Name
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0016573	Biological Process	histone acetylation
GO:0004402	Molecular Function	histone acetyltransferase activity
GO:0008270	Molecular Function	zinc ion binding
GO:0003712	Molecular Function	transcription cofactor activity
GO:0005634	Cellular Component	nucleus

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.020
SRP064423	SRR2545915	Juvenile tuber	2.270
SRP108465	SRR5643513	five period of Gastrodia elata	1.490
	SRR5643514	five period of Gastrodia elata	1.720
	SRR5643515	five period of Gastrodia elata	3.010
	SRR5643524	five period of Gastrodia elata	1.700
	SRR5643525	five period of Gastrodia elata	3.850
	SRR5643528	five period of Gastrodia elata	3.860
	SRR5643658	five period of Gastrodia elata	3.280
	SRR5643659	five period of Gastrodia elata	2.100
	SRR5643660	five period of Gastrodia elata	2.180
	SRR5643661	five period of Gastrodia elata	1.540
	SRR5643662	five period of Gastrodia elata	2.050
	SRR5643663	five period of Gastrodia elata	2.550
	SRR5643664	five period of Gastrodia elata	2.100
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.880
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.670
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.490
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.540
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.980
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.290
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.230
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.550
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.350
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.600
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.600
SRP279888	Gastro	Gastrodia elata tuber	1.62
	Juven	Juvenile tuber	1.84
	Mother_Gastro	Mother tuber of Gastrodia elata	2.60
	Mother_Juven	Mother tuber of Juvenile	3.27