Detail information of GWHGAAEX007819/evm.TU.scaffold_205.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672118459|ref|XP_008782439.1|3.29E-63PREDICTED: uncharacterized protein LOC103701976 [Phoenix dactylifera]
trEMBLtr|M0SGE6|M0SGE6_MUSAM2.00E-58Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P20800_001}
TAIRAT4G209704.00E-22basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000218582812584640+
Transcript Sequence

Network for GWHGAAEX007819

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH11601.00E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.570
SRR2545915Juvenile tuber17.140
SRP108465SRR5643513five period of Gastrodia elata14.230
SRR5643514five period of Gastrodia elata14.930
SRR5643515five period of Gastrodia elata34.060
SRR5643524five period of Gastrodia elata14.560
SRR5643525five period of Gastrodia elata42.270
SRR5643528five period of Gastrodia elata90.540
SRR5643658five period of Gastrodia elata32.870
SRR5643659five period of Gastrodia elata21.120
SRR5643660five period of Gastrodia elata8.980
SRR5643661five period of Gastrodia elata15.950
SRR5643662five period of Gastrodia elata18.230
SRR5643663five period of Gastrodia elata8.960
SRR5643664five period of Gastrodia elata14.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.090
SRR6049655Rhizomagastrodiae_C368-T10_good_114.550
SRR6049656Rhizomagastrodiae_C368-T07_good_114.490
SRR6049657Rhizomagastrodiae_C368-T07_good_117.810
SRR6049658Rhizomagastrodiae_C368-T04_good_115.580
SRR6049659Rhizomagastrodiae_C368-T04_good_118.040
SRR6049660Rhizomagastrodiae_C368-T01_good_132.010
SRR6049661Rhizomagastrodiae_C368-T04_good_126.130
SRR6049662Rhizomagastrodiae_C368-T01_good_111.110
SRR6049663Rhizomagastrodiae_C368-T01_good_123.290
SRR6049664Rhizomagastrodiae_C368-T10_good_118.850
SRR6049665Rhizomagastrodiae_C368-T10_good_118.850
SRP279888GastroGastrodia elata tuber 3.60
JuvenJuvenile tuber5.15
Mother_GastroMother tuber of Gastrodia elata 18.19
Mother_JuvenMother tuber of Juvenile 2.99