Detail information of GWHGAAEX007841/CADD00632.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG12941.00E-12Apurinic/apyrimidinic endonuclease and related enzymes
nrgi|743832777|ref|XP_010935073.1|4.70E-13PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 [Elaeis guineensis]
trEMBLtr|A0A059AT63|A0A059AT63_EUCGR2.00E-13Uncharacterized protein {ECO:0000313|EMBL:KCW56630.1}
TAIRAT4G360501.00E-12endonuclease/exonuclease/phosphatase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000204715722245+
Transcript Sequence

Network for GWHGAAEX007841

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10772APEX2 Base excision repair map03410

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.130
SRR2545915Juvenile tuber16.480
SRP108465SRR5643513five period of Gastrodia elata18.910
SRR5643514five period of Gastrodia elata25.690
SRR5643515five period of Gastrodia elata20.910
SRR5643524five period of Gastrodia elata18.010
SRR5643525five period of Gastrodia elata37.250
SRR5643528five period of Gastrodia elata19.400
SRR5643658five period of Gastrodia elata16.370
SRR5643659five period of Gastrodia elata18.550
SRR5643660five period of Gastrodia elata17.470
SRR5643661five period of Gastrodia elata13.960
SRR5643662five period of Gastrodia elata9.330
SRR5643663five period of Gastrodia elata9.600
SRR5643664five period of Gastrodia elata14.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.580
SRR6049655Rhizomagastrodiae_C368-T10_good_120.270
SRR6049656Rhizomagastrodiae_C368-T07_good_134.400
SRR6049657Rhizomagastrodiae_C368-T07_good_133.150
SRR6049658Rhizomagastrodiae_C368-T04_good_145.860
SRR6049659Rhizomagastrodiae_C368-T04_good_164.030
SRR6049660Rhizomagastrodiae_C368-T01_good_149.000
SRR6049661Rhizomagastrodiae_C368-T04_good_151.330
SRR6049662Rhizomagastrodiae_C368-T01_good_133.120
SRR6049663Rhizomagastrodiae_C368-T01_good_138.280
SRR6049664Rhizomagastrodiae_C368-T10_good_133.380
SRR6049665Rhizomagastrodiae_C368-T10_good_133.380
SRP279888GastroGastrodia elata tuber 45.89
JuvenJuvenile tuber76.05
Mother_GastroMother tuber of Gastrodia elata 32.21
Mother_JuvenMother tuber of Juvenile 43.99