Gene detail

Detail information of GWHGAAEX007842/evm.TU.scaffold_206.1

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695040314\|ref\|XP_009407729.1\|	0	PREDICTED: protein FAR1-RELATED SEQUENCE 9-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9SZL8\|FRS5_ARATH	4.00E-154	Protein FAR1-RELATED SEQUENCE 5
trEMBL	tr\|M0VZI4\|M0VZI4_HORVD	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:MLOC_38921.2, ECO:0000313\|EnsemblPlants:MLOC_38921.4}
TAIR	AT4G38180	1.00E-153	FAR1-related sequence 5

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000206	107	18517	+

Transcript Sequence
>GWHTAAEX007842 GTTCTAGCTTACAAAAAGTAGTGAAGGCTGATACATGACAGGCCGCTATTATTGCATTCATGGAGGTTGCAAGGAGTGAAGGTGATGAACTGATAGCAGACTATGTGAACTGCCTCATGTCATTGGATGCTAATTCCCGCCCAGTTGAAAATATCAACCCATCATCTCTTTTGGTTTCGGCCCCAACACAAATACAAACAGACATTCCTTCAATACTGCATGAATCTTCAGCGCCAAAAGATTTTGTTTCGGATAGTGTGGATACGAAGCTTGAACCAGCTCTGGGTATGGAGTTTGAATCCGATGAGGCTGCGAAAACTTTCTACAATGAGTATGCAAGGAGATTAGGGTTTCCTTTTCGTGTTGGCAGGTCTCGACGATCCAAAGGAACCGAGGAGGTGCTGATTATGAAGAGGTTTGTGTGCTCAAAAGAGGGCATATATCAGAAGAAACCTTCAAGCGAGGGAAGGAGGAAGCGGGAAAGGATCTCGATGAGGGAAGGTTGCCAAGCTCTGATGGAGGTCATTCGTGATAGTGATAGGTGGATAGTGACCAAGCTTGAGAAGGCACATAATCATCACCTTGGTACATGTACAAGGGTTGGTTACCTTCGTTCTCGAGGCTTCATCGATGCTTCAGACAAGGCAAACTTCGTCGTCACTGATGCAGCAATGCTCCTTGGCCAAAACGCCTTCTATCGTGGGGGAGATGCTCAGTGTCTTCTTGATTACTTTAAGAAAATGCAAGCCGATAATCCTGCATTTTTATATGCGATCCAAGTCGACAACATTAGTTGCGTGACAAATGCTTTCTGGGCTGATTCAAAATCTAGATCTTATTATAATTATTTTGGAGACACTGTTACATTTGACACAACTTATAAGAAGAGCAAATACATGATGCCTTTTGTTACCTTTTCAGGAGTAAATCACCACTTGCAGCCAGTTATCTTTGGATGTGCTTTGCTGATGGATGAGAATGAATACTCATTCATTTGGTTGTTTGAAACTTGGCTCGAAGCTATGGGGGGGCGGCCGCCTGTCTCAATTGTGACTGATCAGAATAGAGCCATTGCAGCGGCAATCTCAAAAGTGTTTCATGAGACTAGCCATCGATTTTGTAAATGGCTCATATTTAGCAGAAGCAAGCAGAAGTTAGCTAATGTGTATTCAGCACATCCCACTCTGAAAACTGAGCTTGAAAATTGTGTCAATGTGTCTGAAACAATCAGAGCTTTTGAAACAAACTGGGCAACAATAATTGATAAATTTGATTTAATGAAGAACACATGGCTTCAGGGATTGTTCAACATTCGTCAGAGATGGGTTCCTGTGTATTTAAAGGACATTTTCTTCGCAGAGGTGTCTCCAATTCAGAAACATGACACCATGAATGATTTTTATAAGAAACATTTCAACACAAAGACCTCACTGAAGGTTTTTCTGACACAGTTTGAGTTGGCCATGGCAAAAAGGTATGAAGATGAAGTGCAAGCAGACTTGAACACATTTTGTTCAAAGCCAATTTTGAAGACTGCATCACCCATAGAAAAGCAGGCGGCGCTCATTTACACTAGAGCAATATTTGATAAGTTTCAAGAAGAGTTTGTAGAGTCATTTGGGTACAATGTTTACAAGTTAAAGGATGGTGCTGTTTCTAAATTCAATGTGACAAAAGATGATGCTCTTGAAACATTTATTGTCGCTTATAATGCAACCAAATGTATAGCAACTTGTAGTTGCAGGCACTTTGAGTTTTCAGGAATTCTATGCAGGCATATTATAGGTGTTTTCTTGATGGTTGATGTTAGAATGCTTCCTGAAGAGTGCTTCTTAAGGCGTTGGACAAGAAGTGCTATTGGAGGGGCTCTTTTTAATGCAGGCTCTGCTGATACTGAGGCGACATGTCAGGCTTCAACCTCATCAAGATACAGCGATCTCTGTCATAATGCCATTAAATTTGCAGAGAAAGGAGCATCGTCGGCAGAGATGTACAGAGCAGCAAAGGATGCATTGCACAAGGCATTTGCTGAAATTATTGCTAATGAAAAAAATGCAAGTACATGTGCACATAGGGATCCAATAAATATTAATGAAGAAATTCCGATAGATGATGCAATAAATGGCCAATCATTACAAGATCCTGAGAGGAAGGTTACTAATTTTCTCGGACAGCTACTTGGCTCTTCATGGTCTCTTATGTGATAACTATATATATATATATATGTGTATGTAATGTCGAGCATAAATATGCTCTGAGAGCATAAGAGAGCCCAACAGAAGAGTTTTGTATCTGGCTTTAGGGAATTCCATCTGCAGCAAACAGGTATTGGGCTGAAATTATGAAGGGCAGATTGTATATACAAATAAATGGTTTTCTTACATCATGCTCATAGAATCATTTAGCAAATTAGTCTCTGATATCTTTATTTTGCTAATTTAATCCAAGCTATTAAATATGCTCATATTAGTGCTTGACTATGCCCAATTTAGCCAATCAGCTGCTCGTTTATAGAGTAATTCAGTAATCATGTCATATATATATATATTTTAGGAGTGAGATTAAAAGTTTTGTTTTTTGTAAATAAAAGAAGTTTGAGTGCTGAATATGTAAATTATAAAATCTTAGGTGACTGATAATTTATAGTTTTCTTGTACACAGACAAGTGTTTGATTATTCTTTCTTAAAAGCTTATTTGTTTAACCATCTATTCCTTTTTTTTTATAATAATGAAAATCTTGC

Network for GWHGAAEX007842

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03101.14	FAR1	87	175	1.90E-23
PF10551.8	MULE	268	358	1.20E-26
PF04434.16	SWIM	557	581	2.00E-08

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	FAR1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008270	Molecular Function	zinc ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	21.500
SRP064423	SRR2545915	Juvenile tuber	23.500
SRP108465	SRR5643513	five period of Gastrodia elata	11.060
	SRR5643514	five period of Gastrodia elata	11.600
	SRR5643515	five period of Gastrodia elata	10.650
	SRR5643524	five period of Gastrodia elata	10.700
	SRR5643525	five period of Gastrodia elata	10.130
	SRR5643528	five period of Gastrodia elata	8.040
	SRR5643658	five period of Gastrodia elata	10.330
	SRR5643659	five period of Gastrodia elata	13.730
	SRR5643660	five period of Gastrodia elata	14.820
	SRR5643661	five period of Gastrodia elata	13.200
	SRR5643662	five period of Gastrodia elata	10.090
	SRR5643663	five period of Gastrodia elata	11.180
	SRR5643664	five period of Gastrodia elata	11.790
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.090
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.480
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.030
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.950
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	8.690
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.010
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.630
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.880
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.960
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.310
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.400
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.400
SRP279888	Gastro	Gastrodia elata tuber	11.04
	Juven	Juvenile tuber	18.94
	Mother_Gastro	Mother tuber of Gastrodia elata	4.07
	Mother_Juven	Mother tuber of Juvenile	11.52