Gene detail

Detail information of GWHGAAEX007856/evm.TU.scaffold_206.17

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|434385884\|ref\|YP_007096495.1\|	5.00E-22	DNA/RNA helicase, superfamily I [Chamaesiphon minutus PCC 6605]
nr	gi\|695026634\|ref\|XP_009400623.1\|	0	PREDICTED: uncharacterized protein LOC103984788 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|W1PPC2\|W1PPC2_AMBTC	0	Uncharacterized protein {ECO:0000313\|EMBL:ERN09576.1}
TAIR	HS22044041	4.00E-71	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000206	426087	482374	-

Transcript Sequence
>GWHTAAEX007856 GGAAGCAAAATCTGTTCTCACCCTCGCTGATTCGGCTCTGCTGCCGCAACCTCTATTTTCCAGAACATATTGAGGAGAATGATACAAGTCCTTTCAACAGTATCAACAGAGGTGAAATAAAGAAAGGCACCTACTATAGATGTGCATTTATGGAGCCGATGGGATGGCTGGGTTTGTGATGCAAAAGCTTATCGGTAATATTTTGCTGCTAATGATATGGCTGGTATGAAACAAGCAAACTTTGAACCTAAGCAGCATGATTATCTGTCAGAGACTGAATTATCCTGCACAACTATTTGGAAGGTTTTCTTCAGTTCTAATTTCATAAAGTCCCTTGCAAAGCTAGATTCAACCAAGAAGGATGTTGTCCATATTCTTCTAAGACTATCTAAGGGATGGCGTTCTAAAAGGAAGACTGTTTTTGTTTCTTCATCCAGCCCTTGTGAGTTGGCAAGAATATACAGGGTTGGAGAACATTTTCTAGTGTGGACTGTTGATATAGTGAAAGATGAAATGTACACACAGGTTATAAAGATCTGGGACATTTTACAACTATCAGATTTGACAAATTTAACTGAAAGTCTTGATCGTGTATTTTCAATGTACACTGAGACTTATATAAGTCATTGCAAAAAGAAGTGTTCAAAGGGAGGCATTGAAGTTCCAATAAGCTGGGATTCTAGCCTTTACATTCCACGATATAAATGGCATTGCCCCCTAAAATCAGACAAAGATTCTGAGCTTAATCAGGTGGATAATGATCTTTATGAAAGCTCAGCAGTTAGTGAATGTCTTCTTCTGATGAAGTTTTATGCATTGACATACGGGTTAGCTTGTCATTTATTGACCGCCAAAGATGGAACTGAATTGAGTATTCCGTTTGAGCTGTCAGATGAAGAGAAGGAAGTAGTACGCTTTCCCAAAAGTAGCTTTATTCTGGCAAGATCTGGAACTGGAAAGACCACAATCTTGGCATCAAAACTTGTCCAATTGGAAACACTGCATAGCATTGCTTTACATGATTACTGTTTTGAGGCTACTTCAAGGAATGCTGTTTTTGGCAATAATTTTGAAGGCAAAAAAGAAAATATATTAAGGCAGGTGTTTGTTACTGTCAGTCCAAAGCTCTGTTTGGCCATAAAGGGCCACGTTTATCGACTTAAAAGCTTTGCTGCTACTGGCAATTTGGATGATCCTAAGAACACCCTTGAAATGCATGATAACAGTGACCAAATGGCCCATTTTAAGGACATTCCTGATTCTTTTCATGATTTGCCGGGTCAATATTTACCATTAGTAATCACATTTGCTAAATTCTTGCTGATGCTAGATGGAACAATGGGGAGTTCTTTCTTTTATAAGTTCAGTAATAAAGGAAAATTTTCATGGAAAGGAAAGGGCGTATCTAAATCTCTTGCATTGCAAATATTTTATAGTAAGGAAGTTAATTATGAAAAGTTTGTTGGTTCGTATTGGCATCATTTTAATACTCATCTAACCAAGAATATTGATCCATCTATTGTTTATTCTGAGATAATCTCGCATATCAAAGGAGGTTTCGAGGTAGGTTCATTCCTTGATGGTAAGCTTGGAAGGAAGGAATATATCAGGCTTTCTGAGAAACGCCTCTCTTCTTTTAGTGAAGGGATAAGTGAGAGTATATATGACATATTTCTTGCTTATGAGAAAAGAAAATGTTTAAACGAAGAGTTTGATATTTCTGATTTTGTGATAGATCTTCACCAAAGGTTAAGATTTGATGCCTATTTTGGAAACATGTTTGATTTTGTTTATGTTGATGAGGTTCAAGATCTCACTATGAAACAGATTGCTTTACTGAAATATGTCTGCAATAATTATGAGGAGGGCTTCTTTTTTGCTGGAGACACGGCTCAAACAATCTCCAGGGGAGTTAATTTTCGTTTTGAAGATATTCGCTACTTATTTTACAAAGAGTTTGTATCTGAAAGTAAAGTAAATAAACATAATTTTATGAAGGATAGAGACGGACTTAATGACATTTTCATATTGAATCAAAATTTCAGAACTCATTCTGGTGTTCTGAAGTTGGCAAACAGCATCATTGACCTGCTGCACAAATTTTTCCCTTCTAATATCGACAGAATTGTTCCTGAATTTAGTTTAATTAATGGTGAATCTCCTGTATGGATTGAATCTGACATTAATAAAAATGCAATTAGTATTATATTTGGGAGTACTACCAATGAACGCAACCACATGATTGAATTTGGTGCTGAACAAGTCATTTTAGTACGGGATGAGCGTGCCAAGAAGCAAATTGTAGATCTTATTGGAAACAAGGCACTGGTCCTCACTCTATTGGAGAGCAAGGGTTTGGAATTCGAGGATGTTTTGTTATATGATTTCTTTGGAGGGTCAGCATTAAATAATAAATGGAGAGTTGTATATAATTACATGGATAGTAGTGGAATTGGGGCTCAATTTGATTCATTATCATTTCCAAGTTTCAACTATGATAAACATAATCTTCTTTGTTTTGAACTAAAGCAACTTTATGTTGCTATAACACGAACCCGACAGAGGCTTTGGATCTGTGAGAGCTCTAATGACTCTGGCAAGCCTGTTTTTGATTATTGGAAAAGCTTGCGTTTAATCCAAGTAAGGCACTTAAATGACTTTTGTGCTAAATCAATGACAACAGAGAGTACATTGAATGATTGGAATTTACGAGGCATGAAGTTATTTAATGAAGGGAATTTTGAGATGGATATGATGTGCTTTGAGAGATCTGGCGATTCTTCAAAGAAAAAATGGGCTGAAGCAGCTAATCTTGCTCGAACAGGTGATCACTATGTTTTATCAGACCCCAGTATGGCTGCATCCCACTTTCAAAATGCTGCCAAAAGCTATGAATCAATTGGCAAGTTTGAATCTGCAGCAAACTGTTACATAAAATATGGGGACTACAACAGTGCAGGTCGAATTTATTTGGAGAATTTTGGCGAATCCAAGCTTCGCATTGCAGGGGATTGTTTTGCAATGGCAAAGAACTGGCCAGATGCTGCTGATGCATATATGAATGGAAGTTGTTTCACCAAATTTTTTTCTGTGTGCTCCCAAGGTGAGCTCTTTGATACTGGATTGGAGTTCGTAAAGCAAATCAAGAAAGGTTCAGATTTCAACTTGCAAAAGCGGCATAAACTTGACAAGGCTTCAATGCCATTTTTAAAGCATAAACTTGATAAGGCTTCAATTCCATTTTTAAACGTCTATATTCTGCATTATGCAAGGCTTCATGATATCAAATGCTTAATTGAGCTTGTAAACATTCTCCAATCCATGGAAATTTTTCGAAAACTCTTAAAGTCTAAAAATCTTTTGGATGTGCTGTTAGAATTGGAGTTAGCGATGGGGAATTATCTTGAAGCTGCAGATATTGAACATTTCAAAGGTAATATTCTATTAGAAGCAAATTTGCTTCGAGAGGCCAGGCATTTTGAGAAGTCTGCTAAATTGATTCTACTTCATATTGTTGTAAAGTCCCTCTGGGCATCGGGTGGTAATTTAGGTTGGCCTCTCAAAAGGTTTGCTGAGAAAGAGAAGCTCTTGTCTTTGGTTGAACAGATCTCTAAGGAGGCTTCAACTTCATTTTTTGAGCATGTTTCTTCTGAAATTTACGCAATCTCTGATAAGCCGAAAGATTTATTTAACTTATTAAAATGCTTTGCTGTGGCCCGAAAATATCAAGATATAAGACTTGAAATTTTCACTCTTCGTGAAATGATTGATATTCATCTTCATTTAGCACCATCTAAATACATTTGGGAACCAGGATTTGCATTATATGCTCAGAATTACACAGATATAATTATGTCTCAAAACGGCTGTTCTGTTAAATCTCTGGTCTATATTTGGAAGTTGTGGATTGAAAAAATTCTCAATGTTATTTCTGTTTTGTGTTCGTCCAAAGAGAAAATAGGATATGAGTTTGAATTGTATGAGGAATTTTGCTTTGAGTATTTTGGAATCTTGGTTGACCCTGAACGGAGCTCACTTCTAATGCTCAATCTCGAGATGGATTGGTGTAAAATTCTTGATGCTTGCCAAGTAAGCCATAACTTTAACAAAAAAAATCGCAAACGATATAAGTCAGCTGCTGTACAGTACTGGAGGTCTGAACTGCTTTTACTAGAGCGGGCAATAATGGACAAATTGGAATCAATGCTCAACTCAAATCATTGTACTGAAATTTGCTCCTGTTGTGTGGTTTCTTCTGATATTAATGCTTGTAATTCTTCAGATAAAAAAGAAGTGCTTTTTGCAATTCGCAAGGGTAACATCAATCATGCTATGTATGAAGTTTTGAATTTTCTCAGACGATTAGATAGCATATCCTCTGAATCCAAAGATAAAATGAGCACACTTGTTTCCTTATCATATGGAGATCTTTTCGACATACTGTTTCCTGTGAAGTGGAATGAGGGAAGCTGCAAGCAAATGGTAGATTTTCATAGGAATCTAAAGGCTAGGGAGATGCTTAAACAATCTATTGATAAAGAGCTAAGTGTTTTTGACAGTAAGTTATTGTTTGGCCAGGTTGGGAATATTGTCGTGCTTCTGTTTCTCACTGGATTTTTAAATGACGCTATATTTAGCAAGATCTTAATGCAGTTGATGCAACCCTGGAATGATTTGATATTTATATTGAGAAACTTTTGGATTTGTCACACTCTGAGCTTCTCCTTGATATGGAAGCTTGAAGAAGCGCTGAGGGTTACATTGCAAGCAATTGTAAAGAAGAAATGTGATTATATGCCACCCCAAAGTTTTATTTATATAGTTGACTGTTTGTTGTTTTGTGCATCATCAAGCCTAAGATCTGGAGGCCTTTTTATTAGTTCAAAGCTGAAACTTTTTGAAATGCTCAGATGTTATGGTCTAAAGGGCTTCATGGAGGACAGTTTTGTTGAGATAGAATTTAATTCTGTTCATAAATGTCTGGATTCCATTATAGAGATGATCGAAACTCTCCTAATAAACAAAGAAGAAATTAAGGAGTGGTTGAAACCTTCAGTGGATAAATCAGAATATGGCTATCTATTAAGCAAATTCGTTATTAGTCTCAGTTTGGCAAATCTAAATTCTGGCAGGACTTTTAATCTTGGAGAGTTTCTTTCGAAGTACTCCTTTTAGATGATCTTCACGAGGGATTTGGCGATGCTGTAGCTGAATGTTGGATTCACAGGCAGAATTTAGCTGATTTTGCCAATGCTTTAATGAGGGTTCAAGACTCATTAGTAATTGTGATTTCCAATGATATTGAGTTTAATTTTTTAACGCCAAATGCAATTGTACTCAATTCAGACGAATTAAGAGATCGTGAGCATGTTATTGAAAAATTGTTTCCGACCACCTTCAAGAATGGACGGCAAGCTGCACAAGAATTTGAGGGCAGCAGATTAAGTTGAAGTATTCACTGTAATGAAAATAAAGGAATTTGATAGCAGTAAATTGCAACCTTAATGTAAATATTAGACTGTGCAATGAGTTATTGTTTTGTAAGAGAGACAGTGTTGCATTGAACCTTTTCGGTGCTCTCTCATTAGCATTCTTCCTTCTAAAACTCCGCTCTCCTTTAGTGATATTAACATACTATGCATTTTTGGGGAATCGCTGTTTTCATGTATTAATGGGAACTTTTTCTGAAAGGTTTTCATTTTCATTAGCTTTCTCTATTATTTATTTGTTGCACTGTTGAAATTGGCCCCAGCCTCTGCTAACACTATATGAAGGTGAAATTGATATTGTTTTGGCAAATATTA

Network for GWHGAAEX007856

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00580.20	UvrD-helicase	473	562	3.40E-08

Protein Sequence

>GWHPAAEX007856
MAGMKQANFEPKQHDYLSETELSCTTIWKVFFSSNFIKSLAKLDSTKKDVVHILLRLSKGWRSKRKTVFVSSSSPCELARIYRVGEHFLVWTVDIVKDEMYTQVIKIWDILQLSDLTNLTESLDRVFSMYTETYISHCKKKCSKGGIEVPISWDSSLYIPRYKWHCPLKSDKDSELNQVDNDLYESSAVSECLLLMKFYALTYGLACHLLTAKDGTELSIPFELSDEEKEVVRFPKSSFILARSGTGKTTILASKLVQLETLHSIALHDYCFEATSRNAVFGNNFEGKKENILRQVFVTVSPKLCLAIKGHVYRLKSFAATGNLDDPKNTLEMHDNSDQMAHFKDIPDSFHDLPGQYLPLVITFAKFLLMLDGTMGSSFFYKFSNKGKFSWKGKGVSKSLALQIFYSKEVNYEKFVGSYWHHFNTHLTKNIDPSIVYSEIISHIKGGFEVGSFLDGKLGRKEYIRLSEKRLSSFSEGISESIYDIFLAYEKRKCLNEEFDISDFVIDLHQRLRFDAYFGNMFDFVYVDEVQDLTMKQIALLKYVCNNYEEGFFFAGDTAQTISRGVNFRFEDIRYLFYKEFVSESKVNKHNFMKDRDGLNDIFILNQNFRTHSGVLKLANSIIDLLHKFFPSNIDRIVPEFSLINGESPVWIESDINKNAISIIFGSTTNERNHMIEFGAEQVILVRDERAKKQIVDLIGNKALVLTLLESKGLEFEDVLLYDFFGGSALNNKWRVVYNYMDSSGIGAQFDSLSFPSFNYDKHNLLCFELKQLYVAITRTRQRLWICESSNDSGKPVFDYWKSLRLIQVRHLNDFCAKSMTTESTLNDWNLRGMKLFNEGNFEMDMMCFERSGDSSKKKWAEAANLARTGDHYVLSDPSMAASHFQNAAKSYESIGKFESAANCYIKYGDYNSAGRIYLENFGESKLRIAGDCFAMAKNWPDAADAYMNGSCFTKFFSVCSQGELFDTGLEFVKQIKKGSDFNLQKRHKLDKASMPFLKHKLDKASIPFLNVYILHYARLHDIKCLIELVNILQSMEIFRKLLKSKNLLDVLLELELAMGNYLEAADIEHFKGNILLEANLLREARHFEKSAKLILLHIVVKSLWASGGNLGWPLKRFAEKEKLLSLVEQISKEASTSFFEHVSSEIYAISDKPKDLFNLLKCFAVARKYQDIRLEIFTLREMIDIHLHLAPSKYIWEPGFALYAQNYTDIIMSQNGCSVKSLVYIWKLWIEKILNVISVLCSSKEKIGYEFELYEEFCFEYFGILVDPERSSLLMLNLEMDWCKILDACQVSHNFNKKNRKRYKSAAVQYWRSELLLLERAIMDKLESMLNSNHCTEICSCCVVSSDINACNSSDKKEVLFAIRKGNINHAMYEVLNFLRRLDSISSESKDKMSTLVSLSYGDLFDILFPVKWNEGSCKQMVDFHRNLKAREMLKQSIDKELSVFDSKLLFGQVGNIVVLLFLTGFLNDAIFSKILMQLMQPWNDLIFILRNFWICHTLSFSLIWKLEEALRVTLQAIVKKKCDYMPPQSFIYIVDCLLFCASSSLRSGGLFISSKLKLFEMLRCYGLKGFMEDSFVEIEFNSVHKCLDSIIEMIETLLINKEEIKEWLKPSVDKSEYGYLLSKFVISLSLANLNSGRTFNLGEFLSKYSF

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	11.660
SRP064423	SRR2545915	Juvenile tuber	8.650
SRP108465	SRR5643513	five period of Gastrodia elata	4.340
	SRR5643514	five period of Gastrodia elata	5.130
	SRR5643515	five period of Gastrodia elata	4.330
	SRR5643524	five period of Gastrodia elata	4.570
	SRR5643525	five period of Gastrodia elata	4.780
	SRR5643528	five period of Gastrodia elata	3.690
	SRR5643658	five period of Gastrodia elata	5.380
	SRR5643659	five period of Gastrodia elata	4.650
	SRR5643660	five period of Gastrodia elata	7.660
	SRR5643661	five period of Gastrodia elata	5.800
	SRR5643662	five period of Gastrodia elata	4.060
	SRR5643663	five period of Gastrodia elata	5.160
	SRR5643664	five period of Gastrodia elata	4.770
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.320
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.240
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.320
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.670
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.970
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.010
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.300
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.780
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.300
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.920
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.510
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.510
SRP279888	Gastro	Gastrodia elata tuber	7.55
	Juven	Juvenile tuber	7.19
	Mother_Gastro	Mother tuber of Gastrodia elata	3.61
	Mother_Juven	Mother tuber of Juvenile	6.70