Detail information of GWHGAAEX007858/evm.TU.scaffold_206.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|389861462|ref|YP_006363702.1|3.00E-37ribose 1,5-bisphosphate isomerase [Thermogladius cellulolyticus 1633]
KOGKOG14670Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2)
nrgi|743761230|ref|XP_010941217.1|0PREDICTED: translation initiation factor eIF-2B subunit delta-like [Elaeis guineensis]
trEMBLtr|M0TDR4|M0TDR4_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P01240_001}
TAIRAT5G386400NagB/RpiA/CoA transferase-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000206527367548735+
Transcript Sequence

Network for GWHGAAEX007858

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01008.16IF-2B3396313.60E-76
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03680EIF2B4 RNA transport map03013

Gene Ontology

GO term OntologyName
GO:0044237Biological Processcellular metabolic process

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.240
SRR2545915Juvenile tuber17.160
SRP108465SRR5643513five period of Gastrodia elata12.690
SRR5643514five period of Gastrodia elata14.070
SRR5643515five period of Gastrodia elata10.680
SRR5643524five period of Gastrodia elata15.930
SRR5643525five period of Gastrodia elata12.670
SRR5643528five period of Gastrodia elata13.230
SRR5643658five period of Gastrodia elata11.940
SRR5643659five period of Gastrodia elata15.080
SRR5643660five period of Gastrodia elata17.610
SRR5643661five period of Gastrodia elata15.860
SRR5643662five period of Gastrodia elata16.400
SRR5643663five period of Gastrodia elata15.990
SRR5643664five period of Gastrodia elata16.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.870
SRR6049655Rhizomagastrodiae_C368-T10_good_121.900
SRR6049656Rhizomagastrodiae_C368-T07_good_117.040
SRR6049657Rhizomagastrodiae_C368-T07_good_115.830
SRR6049658Rhizomagastrodiae_C368-T04_good_116.990
SRR6049659Rhizomagastrodiae_C368-T04_good_119.400
SRR6049660Rhizomagastrodiae_C368-T01_good_117.870
SRR6049661Rhizomagastrodiae_C368-T04_good_117.000
SRR6049662Rhizomagastrodiae_C368-T01_good_119.430
SRR6049663Rhizomagastrodiae_C368-T01_good_119.010
SRR6049664Rhizomagastrodiae_C368-T10_good_117.640
SRR6049665Rhizomagastrodiae_C368-T10_good_117.640
SRP279888GastroGastrodia elata tuber 14.94
JuvenJuvenile tuber22.13
Mother_GastroMother tuber of Gastrodia elata 11.81
Mother_JuvenMother tuber of Juvenile 16.48