Gene detail

Detail information of GWHGAAEX007861/evm.TU.scaffold_206.23

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|329805001\|gb\|AEC05331.1\|	1.36E-113	candidate developmental transcription factor TCP3 [Phalaenopsis hybrid cultivar]
Swissprot	tr\|Q93V43\|TCP2_ARATH	4.00E-51	Transcription factor TCP2
trEMBL	tr\|F5ANW3\|F5ANW3_9ASPA	5.00E-114	Candidate developmental transcription factor TCP3 {ECO:0000313\|EMBL:AEC05331.1} (Fragment)
TAIR	AT4G18390	1.00E-50	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000206	712638	715229	-

Transcript Sequence
>GWHTAAEX007861 CTTAATTCCTTCAATTTAAAGGAAAACTTTATCGCCACTATTAGCTATAAATACAATATACTTTTGATAATGGCATTTGTTTAAGTTTTACAAAATATAGATGGCATTTCAGACATTTCGCCAAAACGCTCAGACGGCGCAGTATTTCTCCTTTCCCGATAAGCTCAGTGATGATGCTGGAATGGCAACAATTAGGCATCGAACTCTATGCTTCCTCGAAGAACCCTAATCCAAAGTTCACTCGTCGTCTCAACGATACTGTTGAGTTATCCTGATTGAACTTAGGAATGCAGCCAAAGCACATCCCGTGAAGTCCGGCTCGGTGTCGAGAACGAATTAGAAACAAAAAAGATCTGCTCGGATCCGTGATAAGTATAAATGACATTACCTTTGTTTCTCATGATTTGAGGAAATTGCGTTGTCTAGGGTTAACTTTTCTCTCGCTCATTTACTGCGACAATTCGGGTCTCGCGTTAAAAGCAGAGCTCGATTTCCCTTTTAGTTCTTTAATTTCATGCTAGTTTAATCTGGCGCTAACAGTCTGAAATAGACATAGCTGTGCCCTTGTCTGTACTGAGGCTCCTGCCTTCTCCGGTGGCTCTTAAAGGAAGCCAAGTGTTAAAGCTAAACAAGAGCTTTCAAGTAAACAGCTAATATTGCTTTCTTCTGATGATTCTTTTGATAGCGCTGCGGAAAGCTAAAGTTGGTGTCTGACATTGCTGCCCCTGGATGAGAGCAGCTTTGAAAAGTCTCTTCTATTTTAGTTTTTTAACACCCCCTTCTCCTTCTCACCCCTTTTTACCCTACAAAGCCTAGCTAAAGGACAAAGCTACCGACATTTGATCAAACCTTCCCCTTCTCTCCCTCTCTCTGTGGCTGTTTTACCACTCTCTTCATATAACTATCTGGGAATCAAAAAAGTAATGAGCTTGGGTTGGAGATGGAAGTGAAACACCAACCCAGCAAGAAATCCCGTTTCTGCAATGGCAGCAAGGACGAAGAAAAGGCTCGTGCCATGATGTTATCTCAGCATGCTTCAAGGATTTTTAGGGTCTCTAGAGCTACGGGAGGCAAGGACAGGCACAGCAAGGTCTTGACTTCCAAAGGCCTTCGTGACCGCCGAGTTCGGCTCTCTGTTTCCACGGCAATCGAGTTCTACGATCTTCAGGATAGGCTAGGCTATGACCAGCCAAGCAAAGCCATTGAATGGCTTATCAAGGCCGCCTATTCCGCCATTACTGAGCTCCCCTCGCTCTCCTCATCCTTTCCCGAGCTGGCTGAAAGCAGTCAGAAGAATCTTGAGGCCGAGCCTGGCTCAAGCAGTACCTCAGAAACGAGCAAGGGATCAATACTTTCCCTCTCTCGTTCTGAAACTCGAGTCAAGAGCAACAAAGAAAGGGTCATCGGGGATCAATTTGAGCCAAAGGAGCAATATTCTCATGATTCGAATCACACTACTTTCACCGAGCTACTAAGCGCCAGTTCAATTCAGGGGCCATCCACAGTCACAGCCGATTACTTTGATCAAACTAGCTTCTTTTCTCGGTCTCAGCAACAGCAGCTCCCGTCTTCAATAAATTCCACCAAAAACCAATTTTTTAGCAGTTACTTTCCAATGGGAATGATGCCGTATAGTTATTCCACAGGAGATCAGAATCCTGAGATGCAGCAATTCTCCCTTGTGAATGAAAACCTTGATTACAACCTCAACTTCTCCATAGCTCCAGGTCTAGCCGGTATCCAAAGGGGGACCCTTCAGTCCAATAATCCAACGGCTCACTTGGCATTTTCTCCCTTTTCTTCTTCTTCTTCTTCTTCATCATCATCATCATCATCTTCCGTAGATGCTCACAATTTTCCTTTCATCTTGGGCGCTCCATCTGCAGAGACCCATTTCCATTCTCTATTTGACAGTCGGCTGCAGCTCAATAGGGATCCGGCAACACCCTTCTGCTTGGATGGCTACAGGCCTTCTGATCTCAAAGGAAAGAGAAAGAGCTGATAGTGATGAAGACAAAGCAGCGACCGAGCTTACAAGGCCTTTCATCTCTTTCCCGGTACGTTCTAAAATTGTTTTTTTTCAGCGATGCGATCTTTTTTTTTTTCAGCACCAATTTCATATTTTGAAATAAGAAACATGGGAATGGAATCATATGCAGTTATATAATAAAAAAAATTAAGAAAATTATTACTCCGTTCTGTATTTTGCGGCAGTTTGTCTTTTTCCAAATGGGTGTATTTTGGCATTTTTGTTTATGATTGTTTTACTCATTGGCTCTTTTATTGTCGAAATTCGCGATTTTAGGTAGGCCTTTGTTCGAAGCAATGCTCTTGTTGAGATTCCTATGACATGACATGCCAATGAATATGAATTAAACTGATATGACTGATTTGATGAACGTGCTGCAACTTGTCAAAAGTTGACTGTACTTTTTTTTTTGTTTGCTAATTCTATAGTTGTTATTTTATTATGAACTGATTCGAATGCTATTACAAAGTCAAAACTCTTTT

Network for GWHGAAEX007861

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03634.12	TCP	43	170	3.80E-35

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	TCP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	12.320
SRP064423	SRR2545915	Juvenile tuber	7.300
SRP108465	SRR5643513	five period of Gastrodia elata	11.070
	SRR5643514	five period of Gastrodia elata	9.490
	SRR5643515	five period of Gastrodia elata	6.080
	SRR5643524	five period of Gastrodia elata	8.110
	SRR5643525	five period of Gastrodia elata	1.430
	SRR5643528	five period of Gastrodia elata	1.020
	SRR5643658	five period of Gastrodia elata	1.210
	SRR5643659	five period of Gastrodia elata	2.230
	SRR5643660	five period of Gastrodia elata	1.440
	SRR5643661	five period of Gastrodia elata	1.720
	SRR5643662	five period of Gastrodia elata	3.120
	SRR5643663	five period of Gastrodia elata	1.880
	SRR5643664	five period of Gastrodia elata	3.340
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.360
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	22.270
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.430
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.740
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	14.500
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.730
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.830
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	16.570
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	20.650
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	21.180
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.290
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.290
SRP279888	Gastro	Gastrodia elata tuber	2.82
	Juven	Juvenile tuber	4.05
	Mother_Gastro	Mother tuber of Gastrodia elata	3.65
	Mother_Juven	Mother tuber of Juvenile	2.12