Detail information of GWHGAAEX007864/evm.TU.scaffold_206.26
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|116621240|ref|YP_823396.1| | 6.00E-33 | serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076] |
| KOG | KOG0583 | 0 | Serine/threonine protein kinase |
| nr | gi|731911665|gb|AIZ68217.1| | 0 | CBL-interacting protein kinase 23-like protein [Ornithogalum saundersiae] |
| Swissprot | tr|Q6ZLP5|CIPKN_ORYSJ | 0 | CBL-interacting protein kinase 23 |
| trEMBL | tr|C4P7S2|C4P7S2_SORBI | 0 | Putative uncharacterized protein Sb02g003030 {ECO:0000313|EMBL:EER97982.1} |
| TAIR | AT1G30270 | 0 | CBL-interacting protein kinase 23 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000206 | 870760 | 887897 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007864
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 12 | 267 | 5.40E-74 |
| PF03822.13 | NAF | 308 | 368 | 2.10E-20 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CAMK_CAMKL-CHK1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0007165 | Biological Process | signal transduction |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.580 |
| SRR2545915 | Juvenile tuber | 2.750 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.330 |
| SRR5643514 | five period of Gastrodia elata | 6.120 | |
| SRR5643515 | five period of Gastrodia elata | 11.550 | |
| SRR5643524 | five period of Gastrodia elata | 7.060 | |
| SRR5643525 | five period of Gastrodia elata | 6.190 | |
| SRR5643528 | five period of Gastrodia elata | 69.770 | |
| SRR5643658 | five period of Gastrodia elata | 6.870 | |
| SRR5643659 | five period of Gastrodia elata | 8.780 | |
| SRR5643660 | five period of Gastrodia elata | 6.910 | |
| SRR5643661 | five period of Gastrodia elata | 12.390 | |
| SRR5643662 | five period of Gastrodia elata | 17.560 | |
| SRR5643663 | five period of Gastrodia elata | 15.940 | |
| SRR5643664 | five period of Gastrodia elata | 8.730 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.840 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.420 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.020 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.370 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.070 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.940 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.990 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.530 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 6.510 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.950 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.690 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.690 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.59 |
| Juven | Juvenile tuber | 9.50 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.82 | |
| Mother_Juven | Mother tuber of Juvenile | 23.57 |