Detail information of GWHGAAEX007867/evm.TU.scaffold_206.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743820953|ref|XP_010931914.1|2.16E-116PREDICTED: protein TIC 20-I, chloroplastic [Elaeis guineensis]
Swissprottr|Q8GZ79|TI201_ARATH3.00E-110Protein TIC 20-I, chloroplastic {ECO:0000303|PubMed:23372012} (Precursor)
trEMBLtr|W9RNT4|W9RNT4_9ROSA1.00E-114Uncharacterized protein {ECO:0000313|EMBL:EXB88534.1}
TAIRAT1G049408.00E-94translocon at the inner envelope membrane of chloroplasts 20

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000206989742993132+
Transcript Sequence

Network for GWHGAAEX007867

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16166.4TIC20672415.40E-73
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms64.320
SRR2545915Juvenile tuber69.120
SRP108465SRR5643513five period of Gastrodia elata83.030
SRR5643514five period of Gastrodia elata70.900
SRR5643515five period of Gastrodia elata75.560
SRR5643524five period of Gastrodia elata71.470
SRR5643525five period of Gastrodia elata57.690
SRR5643528five period of Gastrodia elata51.140
SRR5643658five period of Gastrodia elata54.560
SRR5643659five period of Gastrodia elata101.830
SRR5643660five period of Gastrodia elata111.470
SRR5643661five period of Gastrodia elata130.920
SRR5643662five period of Gastrodia elata180.500
SRR5643663five period of Gastrodia elata144.980
SRR5643664five period of Gastrodia elata183.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_188.970
SRR6049655Rhizomagastrodiae_C368-T10_good_192.520
SRR6049656Rhizomagastrodiae_C368-T07_good_195.090
SRR6049657Rhizomagastrodiae_C368-T07_good_187.680
SRR6049658Rhizomagastrodiae_C368-T04_good_163.660
SRR6049659Rhizomagastrodiae_C368-T04_good_160.560
SRR6049660Rhizomagastrodiae_C368-T01_good_169.570
SRR6049661Rhizomagastrodiae_C368-T04_good_179.960
SRR6049662Rhizomagastrodiae_C368-T01_good_181.170
SRR6049663Rhizomagastrodiae_C368-T01_good_171.110
SRR6049664Rhizomagastrodiae_C368-T10_good_185.190
SRR6049665Rhizomagastrodiae_C368-T10_good_185.190
SRP279888GastroGastrodia elata tuber 97.38
JuvenJuvenile tuber99.57
Mother_GastroMother tuber of Gastrodia elata 57.52
Mother_JuvenMother tuber of Juvenile 49.17