Detail information of GWHGAAEX007870/evm.TU.scaffold_206.33
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|451946527|ref|YP_007467122.1| | 0 | N-methylhydantoinase B/acetone carboxylase, alpha subunit [Desulfocapsa sulfexigens DSM 10523] |
| KOG | KOG1939 | 0 | Oxoprolinase |
| nr | gi|672118410|ref|XP_008782413.1| | 0 | PREDICTED: 5-oxoprolinase [Phoenix dactylifera] |
| Swissprot | tr|Q9FIZ7|OPLA_ARATH | 0 | 5-oxoprolinase |
| trEMBL | tr|C5WUM9|C5WUM9_SORBI | 0 | Putative uncharacterized protein Sb01g031300 {ECO:0000313|EMBL:EER92049.1} |
| TAIR | AT5G37830 | 0 | oxoprolinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000206 | 1009607 | 1013386 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007870
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05378.12 | Hydant_A_N | 10 | 215 | 3.90E-60 |
| PF01968.17 | Hydantoinase_A | 235 | 534 | 5.00E-108 |
| PF02538.13 | Hydantoinase_B | 734 | 1257 | 1.10E-218 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01469 | OPLAH, OXP1, oplAH | Metabolic pathways | map01100 |
| Glutathione metabolism | map00480 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0016787 | Molecular Function | hydrolase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 27.170 |
| SRR2545915 | Juvenile tuber | 23.010 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 25.760 |
| SRR5643514 | five period of Gastrodia elata | 26.330 | |
| SRR5643515 | five period of Gastrodia elata | 20.100 | |
| SRR5643524 | five period of Gastrodia elata | 24.730 | |
| SRR5643525 | five period of Gastrodia elata | 23.080 | |
| SRR5643528 | five period of Gastrodia elata | 20.200 | |
| SRR5643658 | five period of Gastrodia elata | 23.500 | |
| SRR5643659 | five period of Gastrodia elata | 19.810 | |
| SRR5643660 | five period of Gastrodia elata | 16.860 | |
| SRR5643661 | five period of Gastrodia elata | 14.500 | |
| SRR5643662 | five period of Gastrodia elata | 10.040 | |
| SRR5643663 | five period of Gastrodia elata | 13.720 | |
| SRR5643664 | five period of Gastrodia elata | 12.930 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 24.340 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 22.690 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 22.700 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 23.090 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 20.060 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 23.510 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 23.920 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 23.570 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 24.180 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 24.600 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 23.770 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 23.770 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 11.28 |
| Juven | Juvenile tuber | 29.57 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.70 | |
| Mother_Juven | Mother tuber of Juvenile | 18.55 |