Detail information of GWHGAAEX007885/evm.TU.scaffold_207.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41974.00E-27FOG: PPR repeat
nrgi|743877538|ref|XP_010907927.1|5.05E-40PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At4g22758 [Elaeis guineensis]
Swissprottr|Q56XJ7|Y4276_ARATH2.00E-30Uncharacterized protein At4g22758
trEMBLtr|W1Q085|W1Q085_AMBTC9.00E-36Uncharacterized protein {ECO:0000313|EMBL:ERN13305.1}
TAIRAT4G227604.00E-27Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000203126716137115-
Transcript Sequence

Network for GWHGAAEX007885

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.960
SRR2545915Juvenile tuber10.060
SRP108465SRR5643513five period of Gastrodia elata13.300
SRR5643514five period of Gastrodia elata16.830
SRR5643515five period of Gastrodia elata14.210
SRR5643524five period of Gastrodia elata15.730
SRR5643525five period of Gastrodia elata31.110
SRR5643528five period of Gastrodia elata37.370
SRR5643658five period of Gastrodia elata56.030
SRR5643659five period of Gastrodia elata8.120
SRR5643660five period of Gastrodia elata7.710
SRR5643661five period of Gastrodia elata7.850
SRR5643662five period of Gastrodia elata8.320
SRR5643663five period of Gastrodia elata11.580
SRR5643664five period of Gastrodia elata9.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.990
SRR6049655Rhizomagastrodiae_C368-T10_good_120.330
SRR6049656Rhizomagastrodiae_C368-T07_good_113.720
SRR6049657Rhizomagastrodiae_C368-T07_good_17.350
SRR6049658Rhizomagastrodiae_C368-T04_good_117.060
SRR6049659Rhizomagastrodiae_C368-T04_good_115.620
SRR6049660Rhizomagastrodiae_C368-T01_good_110.800
SRR6049661Rhizomagastrodiae_C368-T04_good_112.860
SRR6049662Rhizomagastrodiae_C368-T01_good_112.420
SRR6049663Rhizomagastrodiae_C368-T01_good_113.730
SRR6049664Rhizomagastrodiae_C368-T10_good_123.280
SRR6049665Rhizomagastrodiae_C368-T10_good_123.280
SRP279888GastroGastrodia elata tuber 15.89
JuvenJuvenile tuber10.98
Mother_GastroMother tuber of Gastrodia elata 17.64
Mother_JuvenMother tuber of Juvenile 9.53