Detail information of GWHGAAEX007887/evm.TU.scaffold_207.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672187918|ref|XP_008813453.1|2.26E-161PREDICTED: uncharacterized protein LOC103724076 isoform X2 [Phoenix dactylifera]
Swissprottr|Q8RWH8|NIPA9_ARATH4.00E-147Probable magnesium transporter NIPA9
trEMBLtr|A0A061GJ77|A0A061GJ77_THECC1.00E-160Uncharacterized protein isoform 2 {ECO:0000313|EMBL:EOY29940.1}
TAIRAT5G119601.00E-121Protein of unknown function (DUF803)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000203225990283091+
Transcript Sequence

Network for GWHGAAEX007887

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05653.13Mg_trans_NIPA402822.50E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0015693Biological Processmagnesium ion transport
GO:0015095Molecular Functionmagnesium ion transmembrane transporter activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.960
SRR2545915Juvenile tuber36.470
SRP108465SRR5643513five period of Gastrodia elata20.620
SRR5643514five period of Gastrodia elata19.220
SRR5643515five period of Gastrodia elata18.020
SRR5643524five period of Gastrodia elata16.560
SRR5643525five period of Gastrodia elata37.230
SRR5643528five period of Gastrodia elata29.230
SRR5643658five period of Gastrodia elata38.410
SRR5643659five period of Gastrodia elata22.590
SRR5643660five period of Gastrodia elata24.450
SRR5643661five period of Gastrodia elata25.530
SRR5643662five period of Gastrodia elata21.270
SRR5643663five period of Gastrodia elata23.710
SRR5643664five period of Gastrodia elata22.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.110
SRR6049655Rhizomagastrodiae_C368-T10_good_131.840
SRR6049656Rhizomagastrodiae_C368-T07_good_131.630
SRR6049657Rhizomagastrodiae_C368-T07_good_149.240
SRR6049658Rhizomagastrodiae_C368-T04_good_154.200
SRR6049659Rhizomagastrodiae_C368-T04_good_161.490
SRR6049660Rhizomagastrodiae_C368-T01_good_145.430
SRR6049661Rhizomagastrodiae_C368-T04_good_146.310
SRR6049662Rhizomagastrodiae_C368-T01_good_134.770
SRR6049663Rhizomagastrodiae_C368-T01_good_136.030
SRR6049664Rhizomagastrodiae_C368-T10_good_132.040
SRR6049665Rhizomagastrodiae_C368-T10_good_132.040
SRP279888GastroGastrodia elata tuber 27.06
JuvenJuvenile tuber42.16
Mother_GastroMother tuber of Gastrodia elata 30.42
Mother_JuvenMother tuber of Juvenile 34.24