Detail information of GWHGAAEX007888/evm.TU.scaffold_207.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|50812260|ref|NP_390148.2|2.00E-06anthranilate phosphoribosyltransferase [Bacillus subtilis subsp. subtilis str. 168]
KOGKOG14384.00E-13Anthranilate phosphoribosyltransferase
nrgi|297822155|ref|XP_002878960.1|3.54E-13hypothetical protein ARALYDRAFT_901396 [Arabidopsis lyrata subsp. lyrata]
Swissprottr|Q02166|TRPD_ARATH1.00E-13Anthranilate phosphoribosyltransferase, chloroplastic (Precursor)
trEMBLtr|M0RRV6|M0RRV6_MUSAM1.00E-13Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P13260_001}
TAIRAT5G179904.00E-13tryptophan biosynthesis 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000203289871312802+
Transcript Sequence

Network for GWHGAAEX007888

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00591.20Glycos_transf_313473.40E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00766trpD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Biosynthesis of amino acidsmap01230
Tryptophan metabolismmap00380

Gene Ontology

GO term OntologyName
GO:0016757Molecular Functiontransferase activity, transferring glycosyl groups

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.650
SRR2545915Juvenile tuber3.630
SRP108465SRR5643513five period of Gastrodia elata17.370
SRR5643514five period of Gastrodia elata15.600
SRR5643515five period of Gastrodia elata13.560
SRR5643524five period of Gastrodia elata15.520
SRR5643525five period of Gastrodia elata49.470
SRR5643528five period of Gastrodia elata18.560
SRR5643658five period of Gastrodia elata45.640
SRR5643659five period of Gastrodia elata17.300
SRR5643660five period of Gastrodia elata17.370
SRR5643661five period of Gastrodia elata13.500
SRR5643662five period of Gastrodia elata19.380
SRR5643663five period of Gastrodia elata14.570
SRR5643664five period of Gastrodia elata19.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.380
SRR6049655Rhizomagastrodiae_C368-T10_good_118.570
SRR6049656Rhizomagastrodiae_C368-T07_good_113.220
SRR6049657Rhizomagastrodiae_C368-T07_good_116.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_16.080
SRR6049661Rhizomagastrodiae_C368-T04_good_10.220
SRR6049662Rhizomagastrodiae_C368-T01_good_14.620
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_110.420
SRR6049665Rhizomagastrodiae_C368-T10_good_110.420
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber46.59
Mother_GastroMother tuber of Gastrodia elata 4.03
Mother_JuvenMother tuber of Juvenile 35.02