Detail information of GWHGAAEX007898/evm.TU.scaffold_207.24


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17648.00E-1615'-AMP-activated protein kinase, gamma subunit
nrgi|672188212|ref|XP_008813531.1|0PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Phoenix dactylifera]
Swissprottr|Q9CAR3|KINGL_ARATH2.00E-161SNF1-related protein kinase regulatory subunit gamma-1-like
trEMBLtr|A2ZUU7|A2ZUU7_ORYSJ0Uncharacterized protein {ECO:0000313|EMBL:EAZ12494.1}
TAIRAT1G698008.00E-161Cystathionine beta-synthase (CBS) protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000203706804718507-
Transcript Sequence

Network for GWHGAAEX007898

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00571.27CBS2913406.30E-07
PF00571.27CBS3704148.20E-08
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.190
SRR2545915Juvenile tuber30.140
SRP108465SRR5643513five period of Gastrodia elata39.500
SRR5643514five period of Gastrodia elata35.080
SRR5643515five period of Gastrodia elata29.960
SRR5643524five period of Gastrodia elata31.320
SRR5643525five period of Gastrodia elata33.530
SRR5643528five period of Gastrodia elata32.090
SRR5643658five period of Gastrodia elata34.590
SRR5643659five period of Gastrodia elata31.130
SRR5643660five period of Gastrodia elata32.430
SRR5643661five period of Gastrodia elata28.850
SRR5643662five period of Gastrodia elata29.840
SRR5643663five period of Gastrodia elata30.680
SRR5643664five period of Gastrodia elata28.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_153.180
SRR6049655Rhizomagastrodiae_C368-T10_good_143.190
SRR6049656Rhizomagastrodiae_C368-T07_good_152.770
SRR6049657Rhizomagastrodiae_C368-T07_good_156.010
SRR6049658Rhizomagastrodiae_C368-T04_good_169.460
SRR6049659Rhizomagastrodiae_C368-T04_good_171.890
SRR6049660Rhizomagastrodiae_C368-T01_good_156.350
SRR6049661Rhizomagastrodiae_C368-T04_good_165.730
SRR6049662Rhizomagastrodiae_C368-T01_good_148.970
SRR6049663Rhizomagastrodiae_C368-T01_good_154.720
SRR6049664Rhizomagastrodiae_C368-T10_good_152.440
SRR6049665Rhizomagastrodiae_C368-T10_good_152.440
SRP279888GastroGastrodia elata tuber 34.87
JuvenJuvenile tuber34.88
Mother_GastroMother tuber of Gastrodia elata 29.31
Mother_JuvenMother tuber of Juvenile 20.83