Detail information of GWHGAAEX007900/evm.TU.scaffold_207.27


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21862.00E-29Cell growth-regulating nucleolar protein
nrgi|695048586|ref|XP_009412208.1|8.70E-67PREDICTED: UBP1-associated proteins 1C [Musa acuminata subsp. malaccensis]
Swissprottr|O64571|UBA1C_ARATH7.00E-14UBP1-associated proteins 1C
trEMBLtr|M0TMX4|M0TMX4_MUSAM3.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P05710_001}
TAIRAT2G193802.00E-29RNA recognition motif (RRM)-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000203785829798143-
Transcript Sequence

Network for GWHGAAEX007900

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12874.6zf-met1061308.70E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms55.240
SRR2545915Juvenile tuber87.280
SRP108465SRR5643513five period of Gastrodia elata33.610
SRR5643514five period of Gastrodia elata29.530
SRR5643515five period of Gastrodia elata24.470
SRR5643524five period of Gastrodia elata25.160
SRR5643525five period of Gastrodia elata8.370
SRR5643528five period of Gastrodia elata7.150
SRR5643658five period of Gastrodia elata6.650
SRR5643659five period of Gastrodia elata42.970
SRR5643660five period of Gastrodia elata48.400
SRR5643661five period of Gastrodia elata54.520
SRR5643662five period of Gastrodia elata51.580
SRR5643663five period of Gastrodia elata46.280
SRR5643664five period of Gastrodia elata52.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.600
SRR6049655Rhizomagastrodiae_C368-T10_good_130.690
SRR6049656Rhizomagastrodiae_C368-T07_good_145.320
SRR6049657Rhizomagastrodiae_C368-T07_good_148.380
SRR6049658Rhizomagastrodiae_C368-T04_good_138.550
SRR6049659Rhizomagastrodiae_C368-T04_good_149.270
SRR6049660Rhizomagastrodiae_C368-T01_good_156.670
SRR6049661Rhizomagastrodiae_C368-T04_good_142.560
SRR6049662Rhizomagastrodiae_C368-T01_good_136.700
SRR6049663Rhizomagastrodiae_C368-T01_good_142.930
SRR6049664Rhizomagastrodiae_C368-T10_good_132.180
SRR6049665Rhizomagastrodiae_C368-T10_good_132.180
SRP279888GastroGastrodia elata tuber 41.91
JuvenJuvenile tuber32.97
Mother_GastroMother tuber of Gastrodia elata 8.44
Mother_JuvenMother tuber of Juvenile 14.49