Detail information of GWHGAAEX007904/evm.TU.scaffold_207.32_evm.TU.scaffold_207.33_evm.TU.scaffold_207.35
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|116626554|ref|YP_828710.1| | 6.00E-23 | serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|743755071|ref|XP_010931889.1| | 0 | PREDICTED: probable receptor-like protein kinase At5g15080 isoform X2 [Elaeis guineensis] |
| Swissprot | tr|Q9LFP7|Y5158_ARATH | 0 | Probable receptor-like protein kinase At5g15080 |
| trEMBL | tr|W1P784|W1P784_AMBTC | 0 | Uncharacterized protein {ECO:0000313|EMBL:ERN03778.1} |
| TAIR | AT5G15080 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000203 | 917317 | 962822 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007904
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 129 | 405 | 1.20E-47 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 36.630 |
| SRR2545915 | Juvenile tuber | 38.800 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 40.800 |
| SRR5643514 | five period of Gastrodia elata | 45.050 | |
| SRR5643515 | five period of Gastrodia elata | 35.810 | |
| SRR5643524 | five period of Gastrodia elata | 41.020 | |
| SRR5643525 | five period of Gastrodia elata | 39.550 | |
| SRR5643528 | five period of Gastrodia elata | 39.010 | |
| SRR5643658 | five period of Gastrodia elata | 39.260 | |
| SRR5643659 | five period of Gastrodia elata | 33.390 | |
| SRR5643660 | five period of Gastrodia elata | 34.840 | |
| SRR5643661 | five period of Gastrodia elata | 34.530 | |
| SRR5643662 | five period of Gastrodia elata | 33.920 | |
| SRR5643663 | five period of Gastrodia elata | 38.080 | |
| SRR5643664 | five period of Gastrodia elata | 32.190 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 29.090 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 32.310 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 32.750 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 33.610 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 25.200 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 30.150 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 27.510 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 29.790 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 32.310 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 30.080 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 38.810 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 38.810 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 41.04 |
| Juven | Juvenile tuber | 56.03 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 34.48 | |
| Mother_Juven | Mother tuber of Juvenile | 33.76 |