Gene detail

Detail information of GWHGAAEX007909/evm.TU.scaffold_207.43

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000203	1382370	1384947	+

Transcript Sequence
>GWHTAAEX007909 TTCCTGATAAGAACTCCAAAGTTGAGCGCGCTCAAGTAGGAGCACTTCCAAGATAGATGGCCTGCTAGAAAATTTTATCTTATGATGACAAAATTGTGAGGCTTATTTAGCCAAAGTGAACAATACATTGATGCTTAGGAATTTGGGTTGTTACATTGAGATTGATTGAAGACAACATTGAGCCACACAATGTCTCAAGAGCTATGAAGAGTACAGCCAAGGTGAAAAAGATGGCAATACTAACCTATACTCAGTCTCCAAGTGAGAAGTTCTTGCGATTTGTGAAGCCTTAAGTGCAACCCAAGAGGAGGCGATGCGTTTGGACACATTTGAACGCACATCTAAAGTGCATCAATGCGAGCAGGAGCCAAATGTGGCAAAGTCTTAACCATAATATAGTAATTTTGGAGTGGACCAAGGGACAGTTGCAAGGCTTTGAGGGACAGCAAATTATGAACAGATCAACCGAGTGCGTGAAAGACGTGAATCGGATTAAGTTGAGACTAAAAATGTTGGAAGACCTAAATTGGGCTGAGAGGCCGGTCCTTGGGCATGCTCAAGCACTGGGGCAATGTTTAACAAGAGAGGCTTGGGCGTTTGGACGTGCTCAAGCACTAGAAGTTCTGATCCAGAACTTAGTGGGCCTAAGCTTGGCGAAGTCAAGTCAAAAACTGGGCGCTTGGGCTCGCCCAAGCGCCAACAACAGAGTCCTAGGCAAATGCTCAAGTGTTGGACTAGCTCAAGCGATCTGTGTATTTTCGTAACCCAAGACACCAGTGCTTGGGCGCATCAAGTGGCTAATGCAAGAGATTGATGACATTTTGGCATACATGAATGGAAAAATTGGACATGTGGCATGCCCGAGAGGGGAATGCATGACATGTGGCAATCATCCAATGTTTGTAGGGTAAAATTGAGGCTTTTGAGAGTTGTTTGGCGGGCTATAAATACCAAAAAGATACTTAGTGTTTGTATGTGTTGTGAGTGCTTATGACTGTGGCTGCTAGATGTTGTGAATGTTGTGGAGGTCGTGAGGAAGAAAATGGTAGTCGAGTTGAAAAATGCTTTGAGAGTTCTTAAAAAGTGACATACTCTTATAGCTTCTTAATTTTCATATTGAAGTTTTTCGTGGCATTTCTTCAATTTTGGATTTTTCACATAAAATTTGTATGTTTGTGATTTGCTTTGTTTTACCATGTTTTTTCTCTATTTTACTGATAGATTTGCTTCTAAAGGTGATAATGTCAAAGATCCCTCGATGTCTCTACTACAATATCCTTGTCTGTGCTTTGACGAAGAGGACTAAAAGAGGTCTCAAAATCCCAAACAGAAACTCCATTGAGCACATGTAAGCCAAGTGGATCCGTAGGCTTCGACAATGCGGGGACTTCGATCATTATTTAGAAGCTCAACCGCCCGATCATAGAGATCCTATTCACATAAGACTCAAGCTTGGTGTTGTGTGCTAGTTTGATGTGTGTGACGAGATAAACTTAAACATGGGCGGCAGAACTTGGAGTTGTAGATTCAATTATACGCCTATGATGTGCACATGTAGATAGAGTTTGAACCCATGGCTTAACTGCATGTGGTGAGCTTCATCCTTTTGCCTCTTTTTTAGTAAGCAAAAAATGCAAATACATTCATGGTAAAAGAATATAAACAAAAGGGTTGTTTGTTTTGAGCATAGAGATTAGAGATTAACTTTAAGTAGCTAACGACCTTCAGATTGTGTTTGGAAAAGTTTAAGATGAACCTGTCAAAATGCACTTTTGGAATCTCTTCTCAAGAATTCCTATACTTTAGAGTGCACCATAGAGGGGTTGAAATTGATTCATTATAAATAAAGATAATCACAAAAATGCCACTACTATTGAAGTAGCTACAATTATAAGGTAGTTTACAATACATTGAAGCAACTACACTCATTATAAGGAAATTTACAATACATAAGAAAGTTTATTTTCAATCTCTTAGAAATATATAAATCCTTCTCCAAATTATTGAAAAATACCTTATATATGTGGGATGATGCTTGCCAATAGGCCATTGACAGCATAAAGCAATATTTGTTGTATCCACCCACATTGGAAACCCCAATCCTTGAGAATTTTTGTCATTATATGCTAGCTCATAAAATAACGTTTGGTCAATCCATTAAATATTTTTATGATGAGGCCGACACTGACAGAACATATGGTTAAGTGGGTCATGATATTGTCATAATTTGGCATAACTTATGTATCACAAAAATTCGAAAAAGGATAGACACTAGCTAATTTCTTGGTTGTTCATCCATTGTACATAGATTCTCCGCTAAATGATGAATTTCCAGATGAACAAATCTTCAGCCTAGAATGTCAAGAAAATGCTATGGAGAACTTATAATTTATTGTATTGACTTATGAAATATAAATAAAGCCTGCCCTGTAGATTTCCCATTGCCAAATCCAAAATTTATGATTGACTACACATTAAATCAGGAGATGTTTGTGTTTATGGATAGATTGTCATAGTACAATCAAATAAAGATGATAGTTGAAAATGAGAAACAAATGTCTTTATGAGCTCTTATCAA

Network for GWHGAAEX007909

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.260
SRP064423	SRR2545915	Juvenile tuber	0.290
SRP108465	SRR5643513	five period of Gastrodia elata	0.210
	SRR5643514	five period of Gastrodia elata	0.220
	SRR5643515	five period of Gastrodia elata	0.280
	SRR5643524	five period of Gastrodia elata	0.320
	SRR5643525	five period of Gastrodia elata	0.060
	SRR5643528	five period of Gastrodia elata	0.060
	SRR5643658	five period of Gastrodia elata	0.020
	SRR5643659	five period of Gastrodia elata	0.370
	SRR5643660	five period of Gastrodia elata	1.030
	SRR5643661	five period of Gastrodia elata	0.540
	SRR5643662	five period of Gastrodia elata	0.080
	SRR5643663	five period of Gastrodia elata	0.280
	SRR5643664	five period of Gastrodia elata	0.910
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.700
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.520
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.580
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.040
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.110
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.680
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.240
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.810
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.750
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.770
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.470
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.470
SRP279888	Gastro	Gastrodia elata tuber	1.71
	Juven	Juvenile tuber	1.00
	Mother_Gastro	Mother tuber of Gastrodia elata	1.82
	Mother_Juven	Mother tuber of Juvenile	2.50