Detail information of GWHGAAEX007916/evm.TU.scaffold_208.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672156214|ref|XP_008797805.1|1.57E-62PREDICTED: transcription factor bHLH75-like [Phoenix dactylifera]
Swissprottr|Q8GZ13|BEE1_ARATH8.00E-46Transcription factor BEE 1
trEMBLtr|M0S1Q9|M0S1Q9_MUSAM9.00E-57Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P21010_001}
TAIRAT1G738302.00E-43BR enhanced expression 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000209143951145860-
Transcript Sequence

Network for GWHGAAEX007916

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH1471941.20E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.330
SRR2545915Juvenile tuber3.870
SRP108465SRR5643513five period of Gastrodia elata4.370
SRR5643514five period of Gastrodia elata0.410
SRR5643515five period of Gastrodia elata4.580
SRR5643524five period of Gastrodia elata1.060
SRR5643525five period of Gastrodia elata0.940
SRR5643528five period of Gastrodia elata2.820
SRR5643658five period of Gastrodia elata1.940
SRR5643659five period of Gastrodia elata15.170
SRR5643660five period of Gastrodia elata22.090
SRR5643661five period of Gastrodia elata18.470
SRR5643662five period of Gastrodia elata6.260
SRR5643663five period of Gastrodia elata4.670
SRR5643664five period of Gastrodia elata8.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.840
SRR6049655Rhizomagastrodiae_C368-T10_good_10.600
SRR6049656Rhizomagastrodiae_C368-T07_good_12.430
SRR6049657Rhizomagastrodiae_C368-T07_good_12.940
SRR6049658Rhizomagastrodiae_C368-T04_good_12.910
SRR6049659Rhizomagastrodiae_C368-T04_good_11.810
SRR6049660Rhizomagastrodiae_C368-T01_good_12.140
SRR6049661Rhizomagastrodiae_C368-T04_good_12.130
SRR6049662Rhizomagastrodiae_C368-T01_good_11.390
SRR6049663Rhizomagastrodiae_C368-T01_good_11.540
SRR6049664Rhizomagastrodiae_C368-T10_good_11.770
SRR6049665Rhizomagastrodiae_C368-T10_good_11.770
SRP279888GastroGastrodia elata tuber 6.62
JuvenJuvenile tuber9.44
Mother_GastroMother tuber of Gastrodia elata 2.21
Mother_JuvenMother tuber of Juvenile 2.92