Detail information of GWHGAAEX007924/evm.TU.scaffold_208.14
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0757 | 3.00E-133 | Mitochondrial carrier protein - Rim2p/Mrs12p |
| nr | gi|672118233|ref|XP_008782321.1| | 4.43E-171 | PREDICTED: nicotinamide adenine dinucleotide transporter 1, chloroplastic-like [Phoenix dactylifera] |
| Swissprot | tr|Q8RWA5|NDT2_ARATH | 1.00E-137 | Nicotinamide adenine dinucleotide transporter 2, mitochondrial |
| trEMBL | tr|M0S1S2|M0S1S2_MUSAM | 2.00E-155 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P21140_001} |
| TAIR | AT1G25380 | 3.00E-133 | NAD+ transporter 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000209 | 237250 | 274549 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX007924
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00153.26 | Mito_carr | 16 | 106 | 2.90E-26 |
| PF00153.26 | Mito_carr | 113 | 205 | 3.90E-22 |
| PF00153.26 | Mito_carr | 214 | 307 | 3.10E-23 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 15.930 |
| SRR2545915 | Juvenile tuber | 15.660 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 23.300 |
| SRR5643514 | five period of Gastrodia elata | 21.310 | |
| SRR5643515 | five period of Gastrodia elata | 22.980 | |
| SRR5643524 | five period of Gastrodia elata | 28.230 | |
| SRR5643525 | five period of Gastrodia elata | 15.590 | |
| SRR5643528 | five period of Gastrodia elata | 21.000 | |
| SRR5643658 | five period of Gastrodia elata | 15.500 | |
| SRR5643659 | five period of Gastrodia elata | 21.820 | |
| SRR5643660 | five period of Gastrodia elata | 21.210 | |
| SRR5643661 | five period of Gastrodia elata | 24.260 | |
| SRR5643662 | five period of Gastrodia elata | 24.540 | |
| SRR5643663 | five period of Gastrodia elata | 18.850 | |
| SRR5643664 | five period of Gastrodia elata | 24.130 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 16.550 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 28.540 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.650 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 18.350 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 22.480 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 22.700 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 19.350 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.220 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.240 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 22.690 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.920 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.920 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 28.78 |
| Juven | Juvenile tuber | 28.38 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 45.35 | |
| Mother_Juven | Mother tuber of Juvenile | 42.58 |