Detail information of GWHGAAEX007926/evm.TU.scaffold_208.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|476001807|gb|AGI62045.1|5.93E-117AP2-9 [Erycina pusilla]
Swissprottr|Q9FH95|TOE3_ARATH7.00E-90AP2-like ethylene-responsive transcription factor TOE3
trEMBLtr|M9QSA1|M9QSA1_9ASPA2.00E-117AP2-9 {ECO:0000313|EMBL:AGI62045.1}
TAIRAT5G671803.00E-89target of early activation tagged (EAT) 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000209293602295352-
Transcript Sequence

Network for GWHGAAEX007926

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP2681171.20E-09
PF00847.19AP21602101.10E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-AP2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.560
SRR2545915Juvenile tuber5.800
SRP108465SRR5643513five period of Gastrodia elata17.850
SRR5643514five period of Gastrodia elata12.470
SRR5643515five period of Gastrodia elata11.140
SRR5643524five period of Gastrodia elata15.280
SRR5643525five period of Gastrodia elata13.320
SRR5643528five period of Gastrodia elata17.400
SRR5643658five period of Gastrodia elata4.670
SRR5643659five period of Gastrodia elata5.270
SRR5643660five period of Gastrodia elata3.760
SRR5643661five period of Gastrodia elata4.690
SRR5643662five period of Gastrodia elata5.470
SRR5643663five period of Gastrodia elata4.180
SRR5643664five period of Gastrodia elata6.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.540
SRR6049655Rhizomagastrodiae_C368-T10_good_118.750
SRR6049656Rhizomagastrodiae_C368-T07_good_120.680
SRR6049657Rhizomagastrodiae_C368-T07_good_113.500
SRR6049658Rhizomagastrodiae_C368-T04_good_120.630
SRR6049659Rhizomagastrodiae_C368-T04_good_119.590
SRR6049660Rhizomagastrodiae_C368-T01_good_121.200
SRR6049661Rhizomagastrodiae_C368-T04_good_128.330
SRR6049662Rhizomagastrodiae_C368-T01_good_121.630
SRR6049663Rhizomagastrodiae_C368-T01_good_122.440
SRR6049664Rhizomagastrodiae_C368-T10_good_128.520
SRR6049665Rhizomagastrodiae_C368-T10_good_128.520
SRP279888GastroGastrodia elata tuber 12.87
JuvenJuvenile tuber17.34
Mother_GastroMother tuber of Gastrodia elata 66.30
Mother_JuvenMother tuber of Juvenile 33.70