Gene detail

Detail information of GWHGAAEX007928/evm.TU.scaffold_208.18

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0244	0	Kinesin-like protein
nr	gi\|743872446\|ref\|XP_010906553.1\|	0	PREDICTED: chromosome-associated kinesin KIF4A-like isoform X4 [Elaeis guineensis]
Swissprot	tr\|P46869\|FLA10_CHLRE	2.00E-77	Kinesin-like protein FLA10
trEMBL	tr\|B9R784\|B9R784_RICCO	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT5G47820	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000209	316731	344640	-

Transcript Sequence
>GWHTAAEX007928 CCCCTCTTAAAAAAAATAAAATAACGTAATTTAGAGAGAGAATGGTCGTTGGAGGAACAAAGCCGAATTCATTGGGTACCCGTCTCTCTCTATCACTACTTCCAAGTACAAAATACCATAAAGCCCCCACCACACGAGTTATATACAGTGAAAAGTCCGGCTCTAGGACTTACAGAAAGAGGGCATTTTCGGAAAGAATGGCTATCAAAGCCTGCTGGTGCTCCATCCCATCTCTTCCAAACGCACACTTGCGCTCTCTTCTCTCTGTTTTTCTCTTGCTTCACATGGAGCTCTGCTATGCCACTCCATCTTCGGCCTCGGCGTAGCATTGAAGCCCAAGGAAAATGATGGCAGTTGTTGCCATTCAATATAGCTCTGCCTCCATCGCTTTCGCTTCTGTTAACTCCATTTCTTCCTTCTTTCATTGAGACATCTCAACCACTGCCACTGCGCGTTCTCCCAACCCTTCCGGCCCATTCCTTCTCTGTTCCTTCTTCTTGGATTTTCTTGGAATTCTTATTAGGGCTGCACGATAGTGGGGGTTCAGTCGGTTGTTTATGCAATATGACGATTGAGAATGGCGAGGATTGCTGTGTGAAGGTGGCCGTACACACCCGGCCGCTCATCGGGGAGGAGAGGATGCAGGGATGCAAGGATTGTGTTACCGTCGTTCCCGGCCAGCCGCAGGTGCAAATTGGTACTCATTCTTTTACTTTCGATCATATATATGGTAGCACTTGTTCTCCATCAACTGCCATGTTCGATGAACTTGTTTCTCCGCTTGTTGATGGCTTATTCCAAGGATACAATGGTACAGTTCTCGCTTATGGTCAGACTGGTTCGGGGAAAACATACACCATGGGAACTGGGGGCAGAGATGGATATCAAACTGGTATAATTCCACAAGTGATGAATGCATTATATCACAAAATCGAAAGCTTCAAGCATCATGCTGAATTACAGTTGCGAGTTTCATTCATCGAGATTTTGAAAGAAGAAGTGAAGGATTTGCTGGATCCTGGATCTCCTATGAAGGTTGAGCCTGGAAGTGTACATATCGCTAAGGTTGCTGTGCCTGGTAAACCCCCTATACAAATCCGTGAGGGTTCAAACGGAGTCATAACACTGGCTGGTTCTACTGAAGTTGATGTTCGTTCCCAAAAGGAAATGGTTGCCTGCCTTGAGCAGGGCTCTTTGAACCGTGCAACTGGAAGCACAAACATGAATAATCAATCAAGTCGTTCCCATGCCATCTTCACAATCACATTGGAGCAATTGCGTAAACCAAATCAAATATTTTCAGTTGATGGCATGCCAGCAGCGGATGTGACTGAGGATTGTCTTTATGCAAAACTCCATCTGGTCGATCTTGCTGGATCAGAACGGGCCAAGCGCACAGGTTCTGATGGTCTACGATTTAAGGAAGGTGTTCATATTAACAGAGGGCTTCTAGCCTTAGGCAATGTTATAAGTGCACTTGGTGATGAGAAAAAAAGGAAAGATGGTGCCCATGTTCCTTACCGGGACAGCAAACTTACTAGGCTTTTGCAGGATTCACTTGGTGGAAACAGCAGGACTGTTATGATAGCTTGCATCAGTCCAGCTGATATCAACGTGGAGGAAACCCTTAACACCCTTAAATATGCTAACCGTGCTAGAAACATTCAAAACAAACCCATTGTTAATAGGAATCTATTGTCAAATGAGACGCAGAGGCTGCGTCAACAGCTTGAGTATTTGCAAGCAGAGCTACTGTGTGCTCGTGGTGGAGTAGCATCCAATGATGAAGTTCAGGCTCTCAAGGAGAGAAATTCATGGCTTGAAACAACCAATGAAGATCTTTGTCGGGAACTTGAGGAGTATCGAAGCAAATTCTCTGTTCAAGCGCCCTTTACAAACGAGAACCAGAAATATAGAACCGGCTTAGGCAAAATGGAAGGACTGAAGAGAAGCCTGAGTATGGGGACATTTGACTGCCAAATTGTTGAAAGCTTAAAAGGTGATAACTATAAGGAGGTTGATGAAGAGGTAGCCAAGGAATGGGAACATACGTTGATGCAGGACACGATGGGTAGGGAATTATATGAGTTAAACAAGCGCCTTGAGCAGAAAGAGTCAGAGATGAAAATGTTTGGAGGTTTTGAAACAATTGCTCTTAAACAACATTTTGGAAGGAAACTTCTGGAACTTGAGGATGAAAAAAGATCTGTGCAGCTAGAAAGGGATCAGTTATTGGCCGAAGTAGAAAGTCTTGCTGACGGACATCTACAGAAGTTACCAGATATACACTCGCTGAAGCTAAAATCTCTTGAAGCTCAGATACTTGATCTTAAAAAGAAACAGGAGAACCAGGTTCATCTTTTAAAACAAAAGCAGAGGAGTGAAGAAGCAGCAAAAAAACTGCAAGAAGAAATCCAATCAATTAAGGCCCAAAAGGTACAATTGCAACAGAGAATCAAACAAGAGGCAGAACAGTTTCGACAGTGGAAGGCTTCACGTGAAAAGGAGCTTCTGCAGTTGAGGAAGGAAGGCAGGAGAAATGAGTATGAACGACATAAACTTCAAGCTTTGAATCAGAGGCAGAAAATGGTTCTTCAGAGAAAGACAGAAGAGGCTGCTATGGCCGCGAAGAAGTTGAAAGAGTTGCTGGAATATCGCAAATCATCAGCAAGAGATACTTCTGTAATGTCAAATGGAAGTCCACCAGGAAATCAGGCAACCATCGCTATGAATGAGAAATCCTTTCAACGGTGGCTGGATCATGAGCTTGAGATCATAGTGAATGTGCACGAAGTTCGTGTTGAATATGAGAAACAAAGCCAAGTACGATCGGCCATTGCAGAGGAGCTTGCTGCGTTCAAACAAGAGTCTTCATTTTCAGGCGGACTTGGTCCTCCGAAAGGGAAGCATGGACACTCTCGTACATCGAACGTTATGTCACCGAATACGAGATTAACGACGATTGCATCGCTGGAGAACATGGTGAGCATGTCATCAAATGCATTAGTTGCGATGGCTTCTCAGCTTTCAGAGGCTGAGGAACGAGAACGAGCATTAACTAGTCGTGGCCGGTGGAATCAGTTGCGATCTATGGGTGATGCTAAGAACTTGCTTCAGTACATGTTTAATGTTGCTGCTGATGCAAGATGCAAGCTAAGGGACAAGGAAATAGAGATGAAGGAGCTGAAGGAGCAGCTGAATGAGCTCGTTGATATTCTCCGACAGACTGAAACGCGGAGGAAAGAATTGGAAAAGCAAATTAAATCGAAAGATCAGATTGTTTCCATGGAAGTGACAAACACACCGCCGCACAACACCAATGTATCGTTGAAGCATTTTGCCGACGATGAAATAAATACACCGGCTTCTCCAGTAGCTGTGCCCGCACAGAAGCAGCTCAAGTACATGCCCGGCATTGTGAATGATCAACGAAGAGAAATCGCCACCGCCTTTACCAGCCGACCGTTGAAGATGGTGCCGCTTGGGCAGGCATCAATGGGAAGGAAGATAGCTGCTGCAAGCGCAGGAGGAAAACTCTGGAGATGGAAGAGGAGCCATCATCGGTGGCTCATACAATTCAAGTGGAGGTGGCAGAAGCCGTGGAGGCTATCTGAATTGATAAGGCACAGTGACGAGACGATCATGAGAACAAAACCCAGAATCTTACCCGCCCGAAAAATGATTTAAAAAAATAAATAAATAAACACACCCCCGGCAATAATATAGAGCACACCTTCAATCCCTAACCATTTTTTATTTATAAAAGCAGATATATAAATGCAAGCAAGCAAAGCTCTCTAACTGAATCAAAAGCCTCTTCAACCTCCCTCTATCTCTCTTTGTACATATGATTGGTGCATAAGTGAGATTTTTATTTATTTATTATTATCATTATTTTTTTGGAATTAGCACAGGTTTGCTTGAGATGTTTATTAGAGATATATTTCATATTGATGAAGCTTTTTATGCCTTAAAAGTAATATATTATGTTTATTGAACTATGTTGAGCTTGTTAACATGGCGGCTAAAGGGATACTTCTCTGTGCTAAGTGCATAGCAAGTGATGTTTGTGTATTTAATATTCTCCAATTGGTTCTGCATTTCATGTATTATATTGTTCTATGTTCGGATTTCATTGTGAAATGACAAAGAAAGCAAAGGCTATAGTTTATATTGTTCTATGTTCTAAT

Network for GWHGAAEX007928

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	41	367	1.50E-100

Protein Sequence

>GWHPAAEX007928
MTIENGEDCCVKVAVHTRPLIGEERMQGCKDCVTVVPGQPQVQIGTHSFTFDHIYGSTCSPSTAMFDELVSPLVDGLFQGYNGTVLAYGQTGSGKTYTMGTGGRDGYQTGIIPQVMNALYHKIESFKHHAELQLRVSFIEILKEEVKDLLDPGSPMKVEPGSVHIAKVAVPGKPPIQIREGSNGVITLAGSTEVDVRSQKEMVACLEQGSLNRATGSTNMNNQSSRSHAIFTITLEQLRKPNQIFSVDGMPAADVTEDCLYAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDEKKRKDGAHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINVEETLNTLKYANRARNIQNKPIVNRNLLSNETQRLRQQLEYLQAELLCARGGVASNDEVQALKERNSWLETTNEDLCRELEEYRSKFSVQAPFTNENQKYRTGLGKMEGLKRSLSMGTFDCQIVESLKGDNYKEVDEEVAKEWEHTLMQDTMGRELYELNKRLEQKESEMKMFGGFETIALKQHFGRKLLELEDEKRSVQLERDQLLAEVESLADGHLQKLPDIHSLKLKSLEAQILDLKKKQENQVHLLKQKQRSEEAAKKLQEEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKMVLQRKTEEAAMAAKKLKELLEYRKSSARDTSVMSNGSPPGNQATIAMNEKSFQRWLDHELEIIVNVHEVRVEYEKQSQVRSAIAEELAAFKQESSFSGGLGPPKGKHGHSRTSNVMSPNTRLTTIASLENMVSMSSNALVAMASQLSEAEERERALTSRGRWNQLRSMGDAKNLLQYMFNVAADARCKLRDKEIEMKELKEQLNELVDILRQTETRRKELEKQIKSKDQIVSMEVTNTPPHNTNVSLKHFADDEINTPASPVAVPAQKQLKYMPGIVNDQRREIATAFTSRPLKMVPLGQASMGRKIAAASAGGKLWRWKRSHHRWLIQFKWRWQKPWRLSELIRHSDETIMRTKPRILPARKMI

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0003777	Molecular Function	microtubule motor activity
GO:0005524	Molecular Function	ATP binding
GO:0008017	Molecular Function	microtubule binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.420
SRP064423	SRR2545915	Juvenile tuber	18.310
SRP108465	SRR5643513	five period of Gastrodia elata	13.310
	SRR5643514	five period of Gastrodia elata	16.490
	SRR5643515	five period of Gastrodia elata	16.350
	SRR5643524	five period of Gastrodia elata	16.870
	SRR5643525	five period of Gastrodia elata	22.310
	SRR5643528	five period of Gastrodia elata	21.100
	SRR5643658	five period of Gastrodia elata	20.450
	SRR5643659	five period of Gastrodia elata	28.620
	SRR5643660	five period of Gastrodia elata	25.160
	SRR5643661	five period of Gastrodia elata	24.470
	SRR5643662	five period of Gastrodia elata	16.370
	SRR5643663	five period of Gastrodia elata	23.040
	SRR5643664	five period of Gastrodia elata	21.040
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.230
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.450
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	17.790
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.420
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.040
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	13.780
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.870
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	21.360
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	21.340
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	18.150
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	18.150
SRP279888	Gastro	Gastrodia elata tuber	17.30
	Juven	Juvenile tuber	36.75
	Mother_Gastro	Mother tuber of Gastrodia elata	21.35
	Mother_Juven	Mother tuber of Juvenile	20.48