Detail information of GWHGAAEX007931/evm.TU.scaffold_208.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16887.00E-77Golgi proteins involved in ER retention (RER)
nrgi|672111239|ref|XP_008799708.1|2.46E-95PREDICTED: protein RER1A-like [Phoenix dactylifera]
Swissprottr|O48670|RER1A_ARATH2.00E-77Protein RER1A
trEMBLtr|M0SMF7|M0SMF7_MUSAM2.00E-90Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P09400_001}
TAIRAT4G392207.00E-77Rer1 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000209364056383743-
Transcript Sequence

Network for GWHGAAEX007931

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03248.12Rer1311953.30E-73
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.250
SRR2545915Juvenile tuber53.610
SRP108465SRR5643513five period of Gastrodia elata40.180
SRR5643514five period of Gastrodia elata44.830
SRR5643515five period of Gastrodia elata43.730
SRR5643524five period of Gastrodia elata42.250
SRR5643525five period of Gastrodia elata39.360
SRR5643528five period of Gastrodia elata39.510
SRR5643658five period of Gastrodia elata36.570
SRR5643659five period of Gastrodia elata41.040
SRR5643660five period of Gastrodia elata33.070
SRR5643661five period of Gastrodia elata41.500
SRR5643662five period of Gastrodia elata57.180
SRR5643663five period of Gastrodia elata46.860
SRR5643664five period of Gastrodia elata46.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.280
SRR6049655Rhizomagastrodiae_C368-T10_good_173.320
SRR6049656Rhizomagastrodiae_C368-T07_good_148.970
SRR6049657Rhizomagastrodiae_C368-T07_good_142.180
SRR6049658Rhizomagastrodiae_C368-T04_good_144.360
SRR6049659Rhizomagastrodiae_C368-T04_good_144.870
SRR6049660Rhizomagastrodiae_C368-T01_good_144.580
SRR6049661Rhizomagastrodiae_C368-T04_good_143.390
SRR6049662Rhizomagastrodiae_C368-T01_good_139.530
SRR6049663Rhizomagastrodiae_C368-T01_good_140.260
SRR6049664Rhizomagastrodiae_C368-T10_good_138.220
SRR6049665Rhizomagastrodiae_C368-T10_good_138.220
SRP279888GastroGastrodia elata tuber 34.36
JuvenJuvenile tuber42.12
Mother_GastroMother tuber of Gastrodia elata 50.02
Mother_JuvenMother tuber of Juvenile 41.58