Gene detail

Detail information of GWHGAAEX007945/evm.TU.scaffold_208.38

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000209	742878	746982	+

Transcript Sequence
>GWHTAAEX007945 CAGAAATTTAGTGCGCATCCAAATACGTTAGGGTTTTTTTTCTTTGGTTCTCACAGTGGCTACTCCTTATCCTACTAGGTTTGGGGAAAATGGCTGCTTGGAAAGATTTTTGGTGCCCTCTCCTCTCTTAAGATCTTGGAAGGATTTTTTCCCCTCACTTCTTCCAGTATTTCTCTTTCTTACCATCCCTCGATTGACAATATTGTCTTTGTGGGTGTTGATCAGAGTTGATGGCTCCAAACTATGGGAGTTCTATCTTATTGGCTTTTCGTTTGGTCAAAAATATTTCTTTCCTGAAAGGATATTTTGAGCTTTTCTCAACTAATCAAAAATTTTGGAAATTGAAAGGATATTTTGAGCTTGCCTCTCTTGAAGCGGGTAAATTACCTTCTCAAAGGAAGGAGGGGCATAATCTTATTATTCGGTGTTCCTTTCTTGGGTCGGGACTGGTCCTTATTTGTCCCTTCAAATAAAAATATGCCCTTTTTGTAAAAATGCAAAGCCTTTCACTAGAAGCAGGTCTTATAGAAGGAAATCTAGAGGTAGAAAGGCTTCCAGAACCCCATCCCTTGTGTTGGGGCATCCTCGTTGCCCTACTATTGCTGATCCTTTGGTGGTGGTAGATGGAAATCAATCTTTGGGGCATGCATCCTTACCCCCGCATGTGGAAACATTTGTGCAACTAGATTAGAATTTGATGGTTGGCAGTGATTCTAGGTCCTCAGTTATATTTGCTGATTCTAAAACTAGAATGAATTCCTTTGTGCAAACTCAGAAAGTCCCACTGGTACTTCTATTTGGAATTTAGTTGTGATTCCTTTGTGCAAACTCAGAAAGTCCCACTGGTACTTCTATTTGGAATTTAGTTGTGAAGTGGTAGTGACACTAGGGACGAATAGCACCTTCTCTTACTCTTGAAGAACTATAAACTTTTTTTTTGTTGAAATGTTAAAGAGGTCTGCATAAAGAATCCCATATTTTTGAGTGCATGAAATCATCAAAGACACAAAAGTTGGCTTTGTTAGAGCCTAAGTTATCAATTGATTATATTCCTAATTTCTTCTTAGCAATAAAATAGCTGTTTTTTGACCAAAAAATTATTTTTCACAACTTTAATAAACGCTGAGCCAAATTTGATTAAAATAGGGTTTGGGAAAAGTGTTTTTCTTAGTTATATGATATATTGCTTATTACATTAAATGTATGCTTCTCTAACAAATTTTGAAATTATTGCGATCAGTCATTTATGCTCTATTTGTGAAGGAGAAAGAAAATAAGGTTTGGTTAGACCTGAGCAATTTGGCCAACAGTATAACTCATTTTTGGATTATGTGGGGATTCAACAATATCATATTTTCTCATAAAAAGAAGTCCGCTACCTTTTACTTGGTCCAACTTTCAAATTGCACGAGCTATTTCAGAGAAAAGCTTGATCAAGCAAGTGCTGTGTAATTCACCATTGAAGATTTTAGCCCCTTTATCCTTTGATGAAATGGCTCATAAGTGTTCAAAGCTGCTACCTTCGTTTTCCAAAAAGGAACTCTCCGTGTAAGTATTTTTCATGCAGCAATTACTTTAATTCCTAAAATTTTATGTACTTAAAAACTTATAGATTTATAGTTGATCTCTTAAGTAATATTTTTTATAAAATATTGGCAAAATTGTTAGCTCTCAAGGTGAAAATGATTCTTGATTGATAAGGTTCAACTATTTTTTATTTATATTCTTATGGAAACTAAAATTTTTAATAGATTTGAAAATCATAAAGAAGAGGGGCTTTGTTAAAAAATTGTCATTACTAAAGCTTTTGACAATATCAGAAAGGAATTTGTCATCCTTAAACTTCAGAAAATTGAATTTTCCTCTTTTTTTTTTTCTTATTAAATAGGTGAAAGCGTGTATGCCCATCTTTCTTCAATAATCAACAAAAATTTCCATTGTTTCTTTAACTCAAAGAATGGTTTATGACAAAGCTGCCATTTATACCCTTATTTGCTTACCTTGGCAATTGATGAACTGGCATCTTTTTTTTCGAATGAGGTGCTTAGTAATTTTTATTCCATATGCACTCAGAAGTCTGAACATAGAATTGCTCTCACCTTCTTTTTGATGGTGATGTATTATGCTTTTGAAGAGGAGCTAAAATGGAAAATGTTTGCACTTTTAAAAGTATCATTTCTTCATTTAAAAATTCAACAAGTAAAAAGTTGAGCTTAATATCTATTTTTCAAGATATATAAATGTCATTACATTAAGCTCTTTGTAGAGACCATGAATATGGCTATAATGAGTCCCCCTATTACATATTTGGTTGAGGGTGCAAATCTCTAATAGAACTTCAAAAGTAGTTTACTGTATATCATTGGTGGATAAAGTTAGCACTTGGCACCAATGGGGCCGCTTGCTTCATTGTGTGCGGTATTTTTCTTTGAGGAAGGTCCAAATAGAAGATAGATTGATATAAGTTGGGATAAAGTAGCTTTGGCTATGAGAGAAGATCTTCGTCAAATTCAAAGTTTTATTCGAAGCTTGCAAAATTATTGTTTGCTAGATAATTTTGTGCGGAAAATATTGGTGGGATCAACAACATTGCTACTATTTCTTATAAAAGAACAAAAAATATTCTCTTTCTATTTGGGGTTTTGCAGTATTTTGAGGGTAACATAATAATTTTTTTCAAAATAAAGTTGTTTTTGTTTGCAAGATTCTTGAAGTAATGTGGGGTAGTCAAATTACCCGATTTCTTCACTAAATTGACCTTTCCGATTATGCTCAAATCAAGCATAATCTGATTACCCCACAAAATGAAAATCATCCCACTTCGCCGTTGACGCCGCTTCATCATCATCGATGCTTTGCCGTCTCCGATGCTACTTTGTCGTCACTCCGCTTCGCCGTCGACGCTGCCAAATTGCCGACATTGCTCTTTTGTCAGCGACCCCTCTTCGTCGCCGACGCCACTTTGTCGGTCACCGACGCCATTTCTGAAGCATCATCCCTGCTTTGTCGTCATCTGCCGGTGTCGGCGTTTGCCATTTCCAAAGCTGACGTCGGCATCGGCTTCATCCATGTCATTTCTGAAGCTCGCCGACGCCGATGATGGAGCTCGATAACTCCTTCGGCCAGCCGGCCATTGCGGCCCTTGTAGAGAAGGTTGACATTTTATGTTTTTTCTTTTATTTTATTTTTAAAATACATTACAATATGCTCAAAACACTATTGTTTAAATTAAATTGTAAATATTTTACTCATGAATTTTTTGACCTCAAGCTAAGGAGTCTCTTGATAAATAGTTTTTATTTCACTTCTTCCAATAATCCTCGGATGTGGAATGGTATGCCAATTTTCTCCTTGGCAATGGCTAAAAAGTTGTTAATAGGTTCTCAACCTAAGGTCTATTCGAAA

Network for GWHGAAEX007945

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module6

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.720
SRP064423	SRR2545915	Juvenile tuber	9.530
SRP108465	SRR5643513	five period of Gastrodia elata	5.020
	SRR5643514	five period of Gastrodia elata	5.850
	SRR5643515	five period of Gastrodia elata	4.780
	SRR5643524	five period of Gastrodia elata	5.420
	SRR5643525	five period of Gastrodia elata	3.260
	SRR5643528	five period of Gastrodia elata	2.500
	SRR5643658	five period of Gastrodia elata	3.650
	SRR5643659	five period of Gastrodia elata	6.910
	SRR5643660	five period of Gastrodia elata	8.410
	SRR5643661	five period of Gastrodia elata	5.760
	SRR5643662	five period of Gastrodia elata	6.300
	SRR5643663	five period of Gastrodia elata	8.160
	SRR5643664	five period of Gastrodia elata	5.310
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.550
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.790
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.380
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.730
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	18.930
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	20.900
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.070
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	18.290
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.720
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.890
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.010
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.010
SRP279888	Gastro	Gastrodia elata tuber	12.15
	Juven	Juvenile tuber	15.89
	Mother_Gastro	Mother tuber of Gastrodia elata	10.23
	Mother_Juven	Mother tuber of Juvenile	18.45