Detail information of GWHGAAEX007948/evm.TU.scaffold_208.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|694996836|ref|XP_009396286.1|5.77E-32PREDICTED: non-specific lipid-transfer protein-like [Musa acuminata subsp. malaccensis]
Swissprottr|A0AT28|NLTP1_LENCU2.00E-15Non-specific lipid-transfer protein 1 (Precursor)
trEMBLtr|F6I7H9|F6I7H9_VITVI3.00E-27Putative uncharacterized protein {ECO:0000313|EMBL:CCB62897.1}
TAIRAT2G183706.00E-13Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000209847668848338-
Transcript Sequence

Network for GWHGAAEX007948

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14368.5LTP_2121013.00E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006869Biological Processlipid transport
GO:0008289Molecular Functionlipid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.110
SRR2545915Juvenile tuber90.390
SRP108465SRR5643513five period of Gastrodia elata389.180
SRR5643514five period of Gastrodia elata189.740
SRR5643515five period of Gastrodia elata253.930
SRR5643524five period of Gastrodia elata347.660
SRR5643525five period of Gastrodia elata105.210
SRR5643528five period of Gastrodia elata2.490
SRR5643658five period of Gastrodia elata9.930
SRR5643659five period of Gastrodia elata42.730
SRR5643660five period of Gastrodia elata15.260
SRR5643661five period of Gastrodia elata26.820
SRR5643662five period of Gastrodia elata6.640
SRR5643663five period of Gastrodia elata4.080
SRR5643664five period of Gastrodia elata5.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1272.970
SRR6049655Rhizomagastrodiae_C368-T10_good_1118.140
SRR6049656Rhizomagastrodiae_C368-T07_good_1304.990
SRR6049657Rhizomagastrodiae_C368-T07_good_1344.820
SRR6049658Rhizomagastrodiae_C368-T04_good_1260.760
SRR6049659Rhizomagastrodiae_C368-T04_good_1151.980
SRR6049660Rhizomagastrodiae_C368-T01_good_1204.980
SRR6049661Rhizomagastrodiae_C368-T04_good_1552.610
SRR6049662Rhizomagastrodiae_C368-T01_good_1328.800
SRR6049663Rhizomagastrodiae_C368-T01_good_1142.110
SRR6049664Rhizomagastrodiae_C368-T10_good_1172.610
SRR6049665Rhizomagastrodiae_C368-T10_good_1172.610
SRP279888GastroGastrodia elata tuber 0.53
JuvenJuvenile tuber58.08
Mother_GastroMother tuber of Gastrodia elata 0.96
Mother_JuvenMother tuber of Juvenile 17.11