Detail information of GWHGAAEX007950/evm.TU.scaffold_208.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743808743|ref|XP_010928410.1|6.56E-159PREDICTED: ubiquinol oxidase 4, chloroplastic/chromoplastic isoform X1 [Elaeis guineensis]
Swissprottr|Q56X52|AOX4_ARATH8.00E-147Ubiquinol oxidase 4, chloroplastic/chromoplastic (Precursor)
trEMBLtr|A0A059CA13|A0A059CA13_EUCGR1.00E-152Ubiquinol oxidase {ECO:0000256|RuleBase:RU003779}
TAIRAT4G222603.00E-130Alternative oxidase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000209893643920555+
Transcript Sequence

Network for GWHGAAEX007950

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01786.16AOX1373183.40E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0009916Molecular Functionalternative oxidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms138.590
SRR2545915Juvenile tuber95.590
SRP108465SRR5643513five period of Gastrodia elata54.010
SRR5643514five period of Gastrodia elata64.820
SRR5643515five period of Gastrodia elata54.010
SRR5643524five period of Gastrodia elata56.600
SRR5643525five period of Gastrodia elata116.240
SRR5643528five period of Gastrodia elata94.030
SRR5643658five period of Gastrodia elata111.310
SRR5643659five period of Gastrodia elata60.320
SRR5643660five period of Gastrodia elata63.430
SRR5643661five period of Gastrodia elata64.400
SRR5643662five period of Gastrodia elata76.790
SRR5643663five period of Gastrodia elata72.240
SRR5643664five period of Gastrodia elata71.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_162.140
SRR6049655Rhizomagastrodiae_C368-T10_good_155.740
SRR6049656Rhizomagastrodiae_C368-T07_good_156.800
SRR6049657Rhizomagastrodiae_C368-T07_good_179.500
SRR6049658Rhizomagastrodiae_C368-T04_good_190.510
SRR6049659Rhizomagastrodiae_C368-T04_good_1104.320
SRR6049660Rhizomagastrodiae_C368-T01_good_176.810
SRR6049661Rhizomagastrodiae_C368-T04_good_180.230
SRR6049662Rhizomagastrodiae_C368-T01_good_155.810
SRR6049663Rhizomagastrodiae_C368-T01_good_164.540
SRR6049664Rhizomagastrodiae_C368-T10_good_160.320
SRR6049665Rhizomagastrodiae_C368-T10_good_160.320
SRP279888GastroGastrodia elata tuber 50.52
JuvenJuvenile tuber79.53
Mother_GastroMother tuber of Gastrodia elata 69.63
Mother_JuvenMother tuber of Juvenile 64.12