Gene detail

Detail information of GWHGAAEX007951/evm.TU.scaffold_208.44

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0167	3.00E-119	FOG: Armadillo/beta-catenin-like repeats
nr	gi\|672167137\|ref\|XP_008803517.1\|	0	PREDICTED: protein spotted leaf 11-like [Phoenix dactylifera]
trEMBL	tr\|Q0J3B0\|Q0J3B0_ORYSJ	2.00E-158	cDNA clone:J033082G22, full insert sequence {ECO:0000313\|EMBL:BAG95375.1}
TAIR	AT2G05810	3.00E-119	ARM repeat superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000209	922702	925530	-

Transcript Sequence
>GWHTAAEX007951 TCATCATATTCTTAACAATTTGAAAATATTTCTCAGATATTTTTAGATTTATAAAACAAACACTATCATTTCAAATTTTAATAATTTGCTTATTTAATGCATAAAGCTTTGATATTTTATTCTATGTAACCTTACCTCATTTTATTAAATAAGAAAATTCCAGGGTTTGATTAATAAATTTGGGAATATTGAATGCTTAGCGAATAAATTATAAAAAAAAAACTAGTGTTGGATAAGAAAAAGCCCTTTTTGGTTTTATAAAATATGGTAGTTTTGTTACATGCAACTGTTGATGATAATATATTTTTTAAAATTAATTACTTTTTTCTTTGATACAAATAATAAGAAAATTAATTGTATTTCATTAGAAAAAAATATTATCCCAAATAATTTCACAAATAATTGAACAACTAAAATTTACAGAAAATAGGGAGGTGTCCTCGGGAGCCTTCCTCTGCACAGTCCGCAGCAATATCTTCTAATCCAATCCCAAAATCAATCCTCTCCGTCCATCTTCAGATCAACTACTACTGCCTCTTCCCAGTGCTCCTCGTCTTCCTCCCGCCCTAATTTCCCCGCCGCAGATGACTCCCTCCTGTCCGGCGTTCATTCCTCCGATTTCGTCGCCTTCTCCTTCGCCTTCACCGGCAGAAATCTCTGCCATCGACATCATGGACCTCATCCTGCAACACCTCATTCCCGCCCTTCTCGTCTCCGCGCTCTCTGTTAAGTCTCTCGTCGGCAGGTGGCGCGTTCTTCACTCCAAACTCTCCGTCCTTCTATCCTCCCTCACCTCCGCCGCCTCCGCCTCCGCCTCGCCGGAATCTTCATCAAACCCTCTTCTCTCCGATCTTCTCAGGAATCTGCTCTCGACCCTCCGATCGCTCGAATCCCTCTCGTCGCGCTGCCTCGATGGCGGTCTTCCGGGCGGCAAGCTCCTTCTTCAGAGCGACCTGGACATCGCAGGCGCCTCCCTTTCCCTTCAGCTGCACGACCTGGATCTGCTCCTCAGATCGGGCCTCCTGGCTGCCCAGCCGAACCCCCATTCCTCCGCCATCGTCCTTTCCCTTCCCTCCAGCTCCGCCCCCCGTCCCGATCTCACCTTCTTCGTCCGCGACGTCTTCGCCCGCCTCCAGATCGGCGCCATGGATCTCAAGATCAAAGCCCTCGACTCCCTCCTTCAGTTCGTCGCCTCCGATCCCCCCAAGCTCGCCGCCGTCGTCGCCCAGGACGGCGACCTTCCCCTTCTCATCCGCCTCCTCGATCCATCATCCCACTCTCTCATCCGCGATTCCTCTGCCTCCGCCCTATCCCTACTCGCCACCGCCTCCGCCGCCTCCCGCAGCCGCCTCTTCGATGAAGGGGCCCTCGGCCCCCTTCTCCGCCTCATCGACGCCGGATCTTCATCCCTCAAGGAAAAGGCCGCTGCCGCCGTTGAAGCCATCGCCGGCGACGCCTCCAATGCTTGGGCCGTGGCTGCCTATGGCGGCATACCCATCCTCATCAACGCCTGCCGCTCCGGCAACGGATCTCCCGTCGTCCAATCCCTCTCCGCTTCTTGCCTCAACTACATCTCCGCCGTCGACGAGCTCCGTACTTCTATGATGGAGGAAGGTGCCGTCCCCGCTCTTATAGACCTTCTCGCCTCCTCCGGCGATGCTTCGGCGCTGAAGAACGCTGCTCTGTGCCTGCGGTCTCTGGCCGCCGAAGGCGGCGAGGCTACTAGGGTTTTGATACTCGGAGAAGGGGGCCTGAGGCATCTTCAGGCGCTGCTTCACGATCCGGATGTCTCCGAGTACGCCCTGCGCGCGATCCACTCCCTCTCCTTCTCCGCCCCCGCAGCCAAAGCGCTGGCCTCCTCGCCGGCGTTTCTCGCGTGGCTGACGGAGCTAATCCGGCGAGGCAGCTCAGCCGGCGCGGCGGTGCTCTCGAATCTGTCACCGGCGGAAGACCTCAAGCGATCCATGGCGCCGAGCATGCCGGCGCTGGTGAAGATGCTCGAATCCTCGAAGCCGGAGAGCGCGCAGGAGATGGCCGGCCGGGCACTAGTATCCCTCCTCGCCGTTCGCGCCAACCGAAAGGACCTTGCCCGCGATGAAAAAAGCGTGATGCGGATCGTGCAGATGCTGGATCCTCGCCGGGAAGAGGTTTGCAAGAAGTTTCCGGTCACGGCTGTCCTAGCCCTTTCCGCCGGCGGAGGCGGAGACTGCCGCCGGCGGCTAGCCGAGGCCGGCGCTTGCGCGCATCTTCAGAAGCTCGCCGATGGGGATGTCACTGGAGCAAGGAAAGCCCTCCAGCGGATCTCCGGCGGCCGTTTGAAAAACCTCCTATCTTTTGCCCGCCGGGATTGATCTCTCGACGCCGGTGGCGCCATTCCAGTCACCGGGTAATTCCGTAAATGTGGCTGTCGTGCAAATTAATTTGACCGAAAGGGTTTGCAGTTTCAATAATGATGATGATAATTTACAGAGAGGGTTTGAGGGTTTTTTCTGCAATTGTTGATTTTTTGGGGGTATTTTTGTAAAGAACGGGATGCGGAGTTTTTTTATAGAAAGTATCCTATGTTTTGTATTTATCGATCCTCGAGTTTGTAAAGTTTTTTTATTTTTAGGGTTTTTATTATTATTATGAATTTTGTCTGCAAAGGCTGAGTTTGTTTTTTGGTCATCAAATTTCAATGGTTTTATTCCCTTTTTTTGGATTTTTCCTATTGAGCCGTTTATGTTGTAA

Network for GWHGAAEX007951

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00514.22	Arm	335	374	1.70E-06

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.030
SRP064423	SRR2545915	Juvenile tuber	4.700
SRP108465	SRR5643513	five period of Gastrodia elata	15.910
	SRR5643514	five period of Gastrodia elata	14.590
	SRR5643515	five period of Gastrodia elata	13.670
	SRR5643524	five period of Gastrodia elata	15.350
	SRR5643525	five period of Gastrodia elata	18.320
	SRR5643528	five period of Gastrodia elata	13.790
	SRR5643658	five period of Gastrodia elata	12.310
	SRR5643659	five period of Gastrodia elata	19.380
	SRR5643660	five period of Gastrodia elata	23.950
	SRR5643661	five period of Gastrodia elata	28.960
	SRR5643662	five period of Gastrodia elata	26.100
	SRR5643663	five period of Gastrodia elata	25.770
	SRR5643664	five period of Gastrodia elata	21.380
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	25.040
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.850
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.180
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.010
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.250
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.910
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.040
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.650
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	18.480
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	18.480
SRP279888	Gastro	Gastrodia elata tuber	10.06
	Juven	Juvenile tuber	15.11
	Mother_Gastro	Mother tuber of Gastrodia elata	15.10
	Mother_Juven	Mother tuber of Juvenile	15.34