Detail information of GWHGAAEX007960/evm.TU.scaffold_208.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695059575|ref|XP_009418151.1|1.38E-80PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FMP0|MD19A_ARATH6.00E-43Mediator of RNA polymerase II transcription subunit 19a
trEMBLtr|M0U1P4|M0U1P4_MUSAM5.00E-81Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P19370_001}
TAIRAT5G122302.00E-42Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000020910940201114340+
Transcript Sequence

Network for GWHGAAEX007960

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.470
SRR2545915Juvenile tuber15.250
SRP108465SRR5643513five period of Gastrodia elata10.630
SRR5643514five period of Gastrodia elata9.510
SRR5643515five period of Gastrodia elata10.530
SRR5643524five period of Gastrodia elata9.590
SRR5643525five period of Gastrodia elata7.600
SRR5643528five period of Gastrodia elata11.700
SRR5643658five period of Gastrodia elata8.840
SRR5643659five period of Gastrodia elata13.410
SRR5643660five period of Gastrodia elata11.460
SRR5643661five period of Gastrodia elata10.520
SRR5643662five period of Gastrodia elata14.450
SRR5643663five period of Gastrodia elata12.550
SRR5643664five period of Gastrodia elata10.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.830
SRR6049655Rhizomagastrodiae_C368-T10_good_111.260
SRR6049656Rhizomagastrodiae_C368-T07_good_17.280
SRR6049657Rhizomagastrodiae_C368-T07_good_16.800
SRR6049658Rhizomagastrodiae_C368-T04_good_16.770
SRR6049659Rhizomagastrodiae_C368-T04_good_15.440
SRR6049660Rhizomagastrodiae_C368-T01_good_18.270
SRR6049661Rhizomagastrodiae_C368-T04_good_15.950
SRR6049662Rhizomagastrodiae_C368-T01_good_16.390
SRR6049663Rhizomagastrodiae_C368-T01_good_18.150
SRR6049664Rhizomagastrodiae_C368-T10_good_19.820
SRR6049665Rhizomagastrodiae_C368-T10_good_19.820
SRP279888GastroGastrodia elata tuber 8.85
JuvenJuvenile tuber6.82
Mother_GastroMother tuber of Gastrodia elata 10.91
Mother_JuvenMother tuber of Juvenile 11.82