Gene detail

Detail information of GWHGAAEX007965/evm.TU.scaffold_208.59

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1778	CREB binding protein/P300 and related TAZ Zn-finger proteins
nr	gi\|731403829\|ref\|XP_010655213.1\|	PREDICTED: histone acetyltransferase HAC1-like [Vitis vinifera]
Swissprot	tr\|Q6YXY2\|HACL1_ORYSJ	Probable histone acetyltransferase HAC-like 1
trEMBL	tr\|F6GYH3\|F6GYH3_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB45009.1}
TAIR	AT1G79000	histone acetyltransferase of the CBP family 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000209	1183320	1201844	-

Transcript Sequence
>GWHTAAEX007965 CGATGAGGAAGTCTGAGACCCAAAAGAGCAACGAGAAAAGAGTAATCAACCTGCGAGCTGGCACGTTAGGGCACGAATCTTTGTTCTTTCGAAAACAACGTTAAAGATTCAATCTTGGGTATCCTTTTCAATCCGAGCACCCTAAGGATCTGAAATTAGCTCTGGGCATCGTCTCCTGGCCTCGCCCCGTCCTCATTGCGCAGTTTCTGATCCCGATCACTGCTCTTCCCGGCCTCCTCCCATGAAAATGTATCCAGTGCATGGAAGGGATCCTGGCACATGATAGCATGCAGCTGATTGCTAATAAAGCTCTGTTCTAGTGTTTTTTTTCTCAATATATATGAAGATGAATGTGCCAGCACATTTGTCCGGGCAGATCTCTGGGAAAGCACCTGCTCAGGTTGGGCAGCAGGTTCCCGGGTCTACTCAGCTTACAGTCAATTCTTTGTCTTCCCAAATGCAAAGCTTAGGTAATCACATGCACAAAATGGACACTGACCTGTTGATCAAGCGCAAGTGGACACAAGATTATATCATTCAGCTTCTTCAACGCAAGAGTTATAATCCAAGCTCAGAAATCATGCAAAGAATACCTGAGATTGCTAGACGCTTAGAAGAACGTATATTCAGGGATGCAGTTGTAAAAGGAGAGGATTATAGCAACATGTCATCGGCTACGATAGATCAGCGTTTACAGGGAATAACAAAGCTTTTAACTAGTAACCAACAAGCCCATTATACTTCTTCTTCATCATCTGTTAGTGCAATGATACCAACACCTGGTCTAACCAGTTATGGAAACAAAGGCCTTACAGTAGCTCAGGATAACTCCATGATGCCTGCCAGTGGCAGTGGTATGATGACACAAACTTCAGTGAATGCCGGGAATGCTTTGCCTAATGCAGGAGTTGGCATGGGACATATTCCCTCTTTCAGCGTGCCCGCAGGTGGAAATGGTATAGTTTCATCTATAGGTAGGATGCGACAAGCAAGCCAAATGATCCCAACTCCTGGATTAAATAATCAGCAATCCATACCTGTTAACTCTGATTATTCTCTTGGTGGTGGATTTTCAAGCATGGATTCTCTGGCTGTCTCACAACAGCAACAAAAACAGAATGATGGAAGTCAGAACAGTCGATTGCTTCATGGTGTAGGAATGGGTGCTGGACTAAGATCAAGCCTACAGCAGAAGTCTTCTCCATACAATTTCCCCAACACTATTATGAATGGAGGTATGGGCGGTCTGGTTGGGAGTAACATGCCCCGCATGAATGGACCTACCGCACCTGAAGGTTATCTTGGTTCAGTTTTGTACGGGGGATCTCCAAAACCAACACTTCAGAACTTAGATAACCAACATCAGTTGTTAATGGCAGCAACAGTATCACAGCCTATGGCATCATTGATAGGTGATGGTAGTTATGCTATAAATGCGTCTGATCTCTCTGGGTCTGGAAACTTATATGGTTGTGATTCAACGGTTGTAAATAATCAAAATACAAACCTAAGCATGAATTCTAAGTTGAAAACTAATCACGGAATGCCTACTCAAACAAGTTTTCCATCAATGCAACATGCTATTTCCCAAAGCAGGAATTTGCAATCAACACACACAACACAGGAGCTTGGACATTCACAACATCAGATTCAAAATTTCCAGAATCAACAATTTCTGCAGGCCAACCAACTAAATGTTCAACCTGTTCAGAACCAATCATATCAACATAATCAGCAGAATCAACAACTAGTCTCAAACACGAATACTATTAAGAACATTTCCATACCATCCAATTTCTTAGGGCAGCTAATGAATGCAGATGGCATTGAATCTGGAGATTCTTTGCTTCCACATGTAAATGAACAATTTCATCTTTCTGAGTTACAAAATCAGTATCAGAAGAATGCATCATCCAGAAATCTAATCAATGGCTCTAAATTGCTTAATCAGATAGCATGCCCTCAGGATGTTCAGGCTTTATCATCTCAGGCTTCACAAAAGATTTGGGAAACTGAAAAACGTAATGCAGAATCACAAAACGAGCTTAATTGCCTCTTTGTGAAATCACAAGCTGATGTGCTTTCAAAGGAAAATTGGTACCCTCCGTGTCCCCAAAATTCTCTTGTCAAAGAAAAAGTTTTATTTGAGCAGCATATACAGGAGGAATTTCACCAAAGAATGGTAGTGAAGGATGAAGCACAGCCACTTGAAACCCATCCTGATACTCATGCTTTGTGTGGACATGTTACTGCACCAGAATCATCATACAAAACACTTCAGGTTACTAATAGGGAACAAGATTACTTGAAGCAAAAGAGGTGGCTGTTACTCCTACTTCACTCTCGCAAGTGTCCATCTCCTAAAGGGAAATGTCAAGAAGTTAACTGCATTAAGGTTCAGCAGTTATGGAAGCATATTGATACATGCAATACAAAAAACTGCTTGTTTCCTCGCTGCTCTCAGTCGAGAAAATTGTTTAATCATTATATGATTTGTAAAGCATCAGATTGTCCCGTATGCATTCCTGTGCACAAGTTTATAGCATCCATCAAAGTGCAAAATCGTCCTCTTTCTGATACTGGTTTAGTGGAACAAGTAGATGGTTCTTGCAAGAGTATCATGCCCCATGGCATGAATAAGGTGATCAGCAAAGCAGTTTCATCTCCTGAAACAACTGATTGTCAGCAACCTTCATCTAAGCGTTTGAAAGTTCTGAATGCTGCTTTTGTACCTAAGATGGATGCGAATCTTGTTTCTGTTCCCACAACAAACCAAATATTTTCTCCCAATGAGAGACAACCCAATATGTTTCGACAAGTTGATGAAGCTTTGTCTCATAAAACTGAGGCATTTAAAGTTAAAATGGCCACACCATTTGTAGAAAGGTGGTACCCTGTGCCAGAAACCAAGCTTGATGTCAAGCCAAATAGCATCGTTGTTGCAAAAAGTGCTACTGAAACTTGTCTTACCAAGGGAGCCGAGGCTTTTATTGTGAAGGAAATGCAGACAGTAGATAAAGAGAAATGCCAAGCGAAGGTGGAAATACATCAGGAAGCCAATGTACCTCAAACTGATCCTACTGCAGCAAGCAAGTCTGGAAAATCAAAGATAAAAGGGGTATCATTGATTGAGTTATTCAGTATAGAGCAAGTCAGAGATCACATATATAGTCTGAGGCAATGGATTGGGCAGAGCAAATCCAAAGCAGAAAAGAATCAAGCTATGGAGCATTCAATGAGTGAAAACTCGTGCCAGTTGTGTGCTGTGGAGAAGCTTACCTTTGAACCTCCACCTATATACTGTACACTCTGTGGTGCTCGCATCAAGCGAAATGCTATGTATTATACTGTGGGGACTGGTGACACGCGTCACTTCTTTTGTATTCCATGCTACAACGAGGCTCGAGGTGACACTATTGAAGCAGAAGGGTCTACCTTTCCCAAGTCGAGGCTTGAGAAAAAGAAAAATGACGAAGAGACTGAAGAATGGTGGGTTCAATGTGACAAATGTGAAGCGTGGCAGCATCAAATATGTGCCCTTTTTAACGGCAGGAGGAATGATGGAGGACAAGCAGAGTACACATGCCCTAATTGCTACATGGAGGAGGTACAAAAAGGACAGCGCAAGCCGTTGCCTCAAAGTACTGTACTTGGTGCCAAAGATTTACCAAGATCCATTCTTAGTGATCACATTGAACAACGCCTCTTTAGAAGGCTGAAGCAAGAGAGGCAAGAGAGAGCAAGACATCTTGGAAAAAGTTTTGATGAGGTACCAGGGGCAGAAGCGTTAGTTGTGAGGGTTGTATCTTCAGTTGACAAAAAGTTGGAAGTCAAGCATCGATTCTTGGAAATTTTTCAGGAGGAGAATTATCCAACAGAATTTCCTTATAAATCAAAGGTTGTATTACTGTTTCAAAGGATAGAAGGTGTAGAAGTGTGCCTTTTCGGCATGTATGTCCAAGAATTTGGTTCAGAATGTCAGTTTCCTAACCAGAGACGTGTATACCTTTCTTATTTGGATTCTGTGAAGTACTTCAGACCTGAAATTAAAACAGTGACTGGCGAAGCTTTGCGGACTTTTGTGTATCATGAAATTCTGATAGGATATCTTGATTATTGCAAAAAACGCGGCTTTACCAGTTGCTACATATGGGCTTGCCCTCCCCTAAAAGGCGAGGATTATATTCTTTATTGCCACCCCGAGATCCAAAAAACTCCAAAATCTGACAAGCTAAGGGAATGGTATTTATCAATGCTTCGTAAAGCTTCAAAGGAGACTATTGTTGTTGGTCTCACTAATTTATATGACCATTTCTTTACATCCACCGGAGAATGCAAGGCGAAGGTCACTGCAGCACGATTGCCATATTTTGATGGTGATTACTGGCCAGGTGCTGCAGAGGACATGATCTATCAGCTCTGTCAAGAAGATGGAAGAAAGCAACAGAAGAAAGGAAAAACTAAATTAACCTTGACAAAAAGAGCCTTAAAAGCTGCTGGTCATACTGATCTAGGTTGTAATGCATCTAAAGATCTCCTGTTGATGCAAAAGCTTGGGGAAACGATATCTCCAATGAAAGAAGACTTTATTATGGTCCATCTGCAGCATGCCTGCACACACTGCTGTACTCTCATGGTGTCCGGAAATCGTTGGGTTTGCCATTTATGCAAACATTTCCAGATTTGCGATAAGTGTTATGAGGCTGAACAAAAGCTCGAAGATAGGGAAAGGCATCCTTTTAATAGTAGAGAGAGGCACGATCTATTCCGGATAGAGATATCCGACGTGACTGTTGATACGACGGACAAAGATGAGATCGTGGAGAGCGAATTTTTTGACACGAGACAGGCATTCTTGAGCCTCTGTCAAGGAAACCATTACCAGTATGATACGCTCCGCCGGGCAAAGCATTCTTCCATGATGGTGCTTTATCACCTCCACAATCCGACCGCCCCCGCATTCGTGACCACTTGCAATTCATGCCATCACGATATTGAGGCCGGGCAGGGGTGGCGATGTGAGGTCTGCCCAGATTTCGATGTGTGCAATGCTTGTTACCAGAGAGATGGCGCCATTGACCATCCTCATAAGCTGACCAATCACCCTTCAAATGCCGACCGCGATGCGCAGAGCCAAGAAGCCCGGCAAAAACGGGTCCTGCAGCTTCGGAAAATGCTGGATCTGCTGGTTCACGCCTCTCAGTGCCGTTTCCCGCACTGCCAGTACCCCAACTGCCGCAAAGTTAAAGGTCTTTTTCGTCACGGCATTCAGTGCAAGACTCGCGCCGTCGGAGGCTGCCTCCTCTGCAAAAGGATGTGGTATTTGCTACAGCTCCATGCCCGCGCTTGCAAAGAGTCGGAGTGCACTGTCCCACGCTGCAGGGATTTGAAGGAGCACCTGAAGAGAATGCAGCAGCAGTCTGAGTCCAGGCGGCGGGCTGCTGTGATGGAGATGATGCGGCAGAGAGCTGCGGAGATTCAGGGAGTGGAGACCTAATTGTACAGTCAATGTTTTTATAGGGATACACACAAAAATGATCTGCCGAAAGCTCTCGGGGAAAACTTTGGAAAGGATGAGGAGCTCATTGAATCAGTTCAGCAAATTTGGATCCATTGGCAGAGCTTCAGAGGCTATAACGGCAGTCAGGATCAATGGGAATTCTTTGATTTATTAGTGCATTGCTATGTATTCTGTCCACGGTGCTTTGGCTACCAGCTGTGTAATCATAGATATTAGTAATTATTTCTGTTTTTTGAGTAGGAAAAGTTTTTTTTAATGCATTATTTATTTTTCTTCTTATTGCCAGTCTCTTTGCAACAGCTGCTGGAAAAAAGTGGGGCGGCTGCAATAATTTCTGTTTATTTGTTTTTAAAAAAGTATGCTTTACTATATAAAGGTCTCGTTTTTGGTTAGCAGAGGATTTGGACTTATTAATGCTGAACAAAAATTAGCGGATTTATATATATGTATTATGAGTGCTGGTTGCTACTGAAAACGTGCAAGAAGTGCTAAGTTTAATCATAATATAAGCTATAAGCCTAGTACA

Network for GWHGAAEX007965

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02135.15	zf-TAZ	659	727	9.00E-15
PF00628.28	PHD	1044	1086	5.20E-07
PF08214.10	HAT_KAT11	1144	1359	4.90E-30
PF00569.16	ZZ	1542	1583	2.10E-06
PF02135.15	zf-TAZ	1610	1680	3.70E-12

Protein Sequence

>GWHPAAEX007965
MKMNVPAHLSGQISGKAPAQVGQQVPGSTQLTVNSLSSQMQSLGNHMHKMDTDLLIKRKWTQDYIIQLLQRKSYNPSSEIMQRIPEIARRLEERIFRDAVVKGEDYSNMSSATIDQRLQGITKLLTSNQQAHYTSSSSSVSAMIPTPGLTSYGNKGLTVAQDNSMMPASGSGMMTQTSVNAGNALPNAGVGMGHIPSFSVPAGGNGIVSSIGRMRQASQMIPTPGLNNQQSIPVNSDYSLGGGFSSMDSLAVSQQQQKQNDGSQNSRLLHGVGMGAGLRSSLQQKSSPYNFPNTIMNGGMGGLVGSNMPRMNGPTAPEGYLGSVLYGGSPKPTLQNLDNQHQLLMAATVSQPMASLIGDGSYAINASDLSGSGNLYGCDSTVVNNQNTNLSMNSKLKTNHGMPTQTSFPSMQHAISQSRNLQSTHTTQELGHSQHQIQNFQNQQFLQANQLNVQPVQNQSYQHNQQNQQLVSNTNTIKNISIPSNFLGQLMNADGIESGDSLLPHVNEQFHLSELQNQYQKNASSRNLINGSKLLNQIACPQDVQALSSQASQKIWETEKRNAESQNELNCLFVKSQADVLSKENWYPPCPQNSLVKEKVLFEQHIQEEFHQRMVVKDEAQPLETHPDTHALCGHVTAPESSYKTLQVTNREQDYLKQKRWLLLLLHSRKCPSPKGKCQEVNCIKVQQLWKHIDTCNTKNCLFPRCSQSRKLFNHYMICKASDCPVCIPVHKFIASIKVQNRPLSDTGLVEQVDGSCKSIMPHGMNKVISKAVSSPETTDCQQPSSKRLKVLNAAFVPKMDANLVSVPTTNQIFSPNERQPNMFRQVDEALSHKTEAFKVKMATPFVERWYPVPETKLDVKPNSIVVAKSATETCLTKGAEAFIVKEMQTVDKEKCQAKVEIHQEANVPQTDPTAASKSGKSKIKGVSLIELFSIEQVRDHIYSLRQWIGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTLCGARIKRNAMYYTVGTGDTRHFFCIPCYNEARGDTIEAEGSTFPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYMEEVQKGQRKPLPQSTVLGAKDLPRSILSDHIEQRLFRRLKQERQERARHLGKSFDEVPGAEALVVRVVSSVDKKLEVKHRFLEIFQEENYPTEFPYKSKVVLLFQRIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEIKTVTGEALRTFVYHEILIGYLDYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKASKETIVVGLTNLYDHFFTSTGECKAKVTAARLPYFDGDYWPGAAEDMIYQLCQEDGRKQQKKGKTKLTLTKRALKAAGHTDLGCNASKDLLLMQKLGETISPMKEDFIMVHLQHACTHCCTLMVSGNRWVCHLCKHFQICDKCYEAEQKLEDRERHPFNSRERHDLFRIEISDVTVDTTDKDEIVESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNSCHHDIEAGQGWRCEVCPDFDVCNACYQRDGAIDHPHKLTNHPSNADRDAQSQEARQKRVLQLRKMLDLLVHASQCRFPHCQYPNCRKVKGLFRHGIQCKTRAVGGCLLCKRMWYLLQLHARACKESECTVPRCRDLKEHLKRMQQQSESRRRAAVMEMMRQRAAEIQGVET

Gene family

Gene family	subfamily
Transcription Factors Family	TAZ

KEGG pathway

KO	Enzyme	pathway	mapID
K04498	EP300, CREBBP, KAT3	Wnt signaling pathway	map04310
		Notch signaling pathway	map04330
		TGF-beta signaling pathway	map04350
		JAK-STAT signaling pathway	map04630
		HIF-1 signaling pathway	map04066
		FoxO signaling pathway	map04068
		cAMP signaling pathway	map04024
		Cell cycle	map04110
		Adherens junction	map04520
		Glucagon signaling pathway	map04922
		Relaxin signaling pathway	map04926
		Thyroid hormone signaling pathway	map04919
		Melanogenesis	map04916
		Long-term potentiation	map04720

Gene Ontology

GO term	Ontology	Name
GO:0016573	Biological Process	histone acetylation
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0008270	Molecular Function	zinc ion binding
GO:0004402	Molecular Function	histone acetyltransferase activity
GO:0003712	Molecular Function	transcription cofactor activity
GO:0005634	Cellular Component	nucleus

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	31.710
SRP064423	SRR2545915	Juvenile tuber	21.740
SRP108465	SRR5643513	five period of Gastrodia elata	11.490
	SRR5643514	five period of Gastrodia elata	10.200
	SRR5643515	five period of Gastrodia elata	11.180
	SRR5643524	five period of Gastrodia elata	9.520
	SRR5643525	five period of Gastrodia elata	11.650
	SRR5643528	five period of Gastrodia elata	9.710
	SRR5643658	five period of Gastrodia elata	11.150
	SRR5643659	five period of Gastrodia elata	12.560
	SRR5643660	five period of Gastrodia elata	13.690
	SRR5643661	five period of Gastrodia elata	11.860
	SRR5643662	five period of Gastrodia elata	12.240
	SRR5643663	five period of Gastrodia elata	12.900
	SRR5643664	five period of Gastrodia elata	14.540
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.680
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.810
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	22.730
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.970
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	31.900
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	22.420
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	23.890
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.010
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	15.520
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.400
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.400
SRP279888	Gastro	Gastrodia elata tuber	16.06
	Juven	Juvenile tuber	13.00
	Mother_Gastro	Mother tuber of Gastrodia elata	17.95
	Mother_Juven	Mother tuber of Juvenile	16.66