Gene detail

Detail information of GWHGAAEX007966/evm.TU.scaffold_208.60

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|197105211\|ref\|YP_002130588.1\|	9.00E-59	enoyl-CoA hydratase [Phenylobacterium zucineum HLK1]
KOG	KOG1680	2.00E-102	Enoyl-CoA hydratase
nr	gi\|672115998\|ref\|XP_008781149.1\|	1.96E-136	PREDICTED: probable enoyl-CoA hydratase, mitochondrial [Phoenix dactylifera]
Swissprot	tr\|Q8GYN9\|MENB_ARATH	1.00E-28	1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal
trEMBL	tr\|M0TPC3\|M0TPC3_MUSAM	3.00E-135	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P10700_001}
TAIR	AT4G16210	2.00E-102	enoyl-CoA hydratase/isomerase A

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000209	1217214	1230853	-

Transcript Sequence
>GWHTAAEX007966 CTTAATTTACATTTGTAAAACTCATGAGCATTATTTATAAGAAAGCCAATATCTTCAAAACCCATGATGTAGAAATTTAGTTTTTGTGTCTTTTGCAAGCTTACACTTGGAAAATAGTCCCCATAGAAGCGGCAGGCCAGGCCGGGTTAGGCTAGGCTTCATGGTAGCGGGAACATGCGCCAAGACAAAAAAAAATTACTGGTCATATTAACCCATATTTAACTGGGCACGTCCCATGAGTTCAAGCTCACCAGCCATTATTACCGTTAGTTCCTTACCCGTCACTAACCGATCTGTAGTTAGTTCTCCTCGCTTCAGGCCGCTCCACTTTGCTGTGTCTTCAGAAACGAAAATGGCACCTCTTTCCATCGCTTCCTCTTCGCCGGAAAGCTCCATCCTCGTCGATCGCCTCCCCTCCGGCGTCGCTGTTGTTACGATCAACCGTCCGAAATCCCTAAACTCTCTTACGCTGCCGATGATAATTGATCTGGCGAAAACCTTCAAAAGCCTCGATAGCGATCCGGCTGTAGGCGCGCTGGTGATTTTTGGGAGGGGAAAAGCGTTCTGCACCGGAATCGATCTAACAGCGGCTGAGAAGGTTTTCAAGGGAGATGTCAAGGACGAGGAGGCAAATCCCGTCGTGCAGATGGATCGTTGTCGGAAGCCGATTATAGGCGCCGTCGCTGGGTTCGCCGTGACGGGCGGATTCGAAATTGCGCTTGCGTGCGACATTATCGTTGCCGGAAGGGACGCCAAATTCGTCGACACTCACTGCAGGCTCGGAATATTTCCCTCGTGGGGCCTTTCACAAAAGCTTCCGCGCTTGATCGGACCAAACCGGGCGCGAGAAATCTCGTTCACCTGCATGCCCATAACCGCCGATATGGCGGAGAGGTGGGGCCTTGTTAACTGTGTTGTCGACAGTAGTGATGTGCTGAATGCTGCCGTCAACATCGCCGAAAACATTTTGCGGAACGACAAAGACATGGTGTTGAGGTACAAATCTATCACCAATGATGGCATCAAGTTGGATCTTGAAAGTGCCCTCAAATTGGAAAAGGAGAGAGCACATGAGTACTATAATGGCATGACCAAGGAACAATTTGTGACGTTGCAGAAATATATTTCTGATAGAGGCTCCAGGCGTTCTTCCAAGCTATAAAAATCTGCAGCAAATAGCAATAAAAAACTTGTGCAGCAGTACACTGTTTGACGTTTTCATATTTGAATATCTAACACCTAAGTATGTCTATGGTTACCCTAAAATGCTGATTAATTTAGTAATAAGAATGGCAGGATCACAACTACCCTTTTATAAAAGAAATCTTACGTTCCTTCTATCTCACCATTCATTTTCTTTTATTTTCCTTTCTTTTCTTTCTTCTTTTTTTAATGGAGAAGAAGACATAAGCAAGCTATTAAAGAAGAAAAAAAATTACTTTGTTGTTTTGTCAAATGTTTTCTTAGATCATCTGTAAATTATTTTTGCTTTAAAAAATGAGATGAACAGTG

Network for GWHGAAEX007966

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00378.19	ECH_1	60	283	2.60E-50

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01692	paaF, echA	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Biosynthesis of antibiotics	map01130
		Fatty acid metabolism	map01212
		Propanoate metabolism	map00640
		Butanoate metabolism	map00650
		Fatty acid degradation	map00071
		Cysteine and methionine metabolism	map00270
		Lysine degradation	map00310
		Phenylalanine metabolism	map00360
		Tryptophan metabolism	map00380
		beta-Alanine metabolism	map00410
		Limonene and pinene degradation	map00903
		Geraniol degradation	map00281
		Benzoate degradation	map00362
		Aminobenzoate degradation	map00627
		Caprolactam degradation	map00930

Gene Ontology

GO term	Ontology	Name
GO:0003824	Molecular Function	catalytic activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	44.520
SRP064423	SRR2545915	Juvenile tuber	39.240
SRP108465	SRR5643513	five period of Gastrodia elata	42.190
	SRR5643514	five period of Gastrodia elata	33.180
	SRR5643515	five period of Gastrodia elata	34.320
	SRR5643524	five period of Gastrodia elata	34.440
	SRR5643525	five period of Gastrodia elata	48.440
	SRR5643528	five period of Gastrodia elata	41.480
	SRR5643658	five period of Gastrodia elata	43.730
	SRR5643659	five period of Gastrodia elata	26.910
	SRR5643660	five period of Gastrodia elata	35.010
	SRR5643661	five period of Gastrodia elata	30.870
	SRR5643662	five period of Gastrodia elata	39.910
	SRR5643663	five period of Gastrodia elata	31.200
	SRR5643664	five period of Gastrodia elata	45.160
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	44.470
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	28.360
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	38.600
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	40.350
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	38.160
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	45.660
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	39.730
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	38.330
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	32.420
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	37.430
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	39.510
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	39.510
SRP279888	Gastro	Gastrodia elata tuber	42.36
	Juven	Juvenile tuber	53.62
	Mother_Gastro	Mother tuber of Gastrodia elata	38.98
	Mother_Juven	Mother tuber of Juvenile	43.92