Gene detail

Detail information of GWHGAAEX007985/evm.TU.scaffold_209.14

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|56697985\|ref\|YP_168356.1\|	1.00E-07	monooxygenase, putative [Ruegeria pomeroyi DSS-3]
KOG	KOG0536	9.00E-65	Flavohemoprotein b5+b5R
nr	gi\|743773798\|ref\|XP_010917252.1\|	7.49E-86	PREDICTED: cytochrome b5 domain-containing protein RLF [Elaeis guineensis]
Swissprot	tr\|Q9LXD1\|RLF_ARATH	3.00E-65	Cytochrome b5 domain-containing protein RLF {ECO:0000305}
trEMBL	tr\|K3ZWV7\|K3ZWV7_SETIT	2.00E-78	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Si031089m}
TAIR	AT5G09680	9.00E-65	reduced lateral root formation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000207	777267	816418	-

Transcript Sequence
>GWHTAAEX007985 ACATAAATAATATTTTCTTACCGCGAGCCGTGTGGAATGTACCGTTCTTTCCTCCGCAAGAAAAAGAAAAATCAAATCAAAACTGAGCGCCCCACGCACACATCCGGCCGTCGAAGTTTCCTCTCCGTCGTTGACGTCGCCGTCCAACGTCGTCGCAGCTCCACTTTTGGTTGCTGATGCTCGCTACTTCCTCTCTGCCCTTCGCTGCGCTTCTTCGCTGCTCGTATTCCCTGTTTTATGATCGAGGAGAAAGTATCACTCAATTTTCAAGTCACATTAATGGGGAAAGATAACATTCTCATCTTCAATTAGCATTTGGATCGATCGAAGGTGAAACATTGTCAAATTGGGGATGATTAAGTGTTATGAATATGAAATTAAAGCTTACCTTTTATATCTGAGGAGGCTTATCTGATACGATTATTTTTGAAGTTGCATAACTGAAGTTAGCAATGAATGACAGTGATGCCAACGACTTCACCTTTTGCAAAGTCGATTCACCTGCATATAATGATTGTGAGGAGTCACCTAAAGCGATTCCTGATGTTAATAAGATCACTCGTAAAGATAATTTTCCTGATGCCAAGGACTTGAGTATTTATTCTGTTCATGATAAAAGTTCATCCGTCAAATTGCCTATAAAATCTGTAACACCAAGTGAATTTCGATCATATGGTTCAATTGACATGCAACAACAAGATTCCAAATTCAATGAATCACTAAAGCTTGAGGTAGCAAGAACCAATGGAGTTTCTCTACAGAAACCTGCACATAAAAAATCAGCTGTGCGTGCCAAAGTACCATTTGAGAAGGGTTATAGTCCAATGGATTGGCTGAAGCTTACTCAAATGCATCTTGACCTTGCAGGGCTTAACGGCCAGACAAATAGAAGGCTTATTACTTTGGATGAGGTTAAGAAGCATAAAACAGAAGGTTCTATGTGGACGGTTTTAAAGGGCCGTGTGTATAATATCTCTCCATACATGAAATTTCACCCTGGAGGTGTTGATATGCTGACAAAGGCTGCTGGAAAAGACTGCACTTCTTTATTCAATAAATATCATGCTTGGGTTAGTGCTGAATTTCTACTCGAAAAGTGCTTTGTTGGAGTGCTGGATAGCGGTGATTCATGACGACTCGTACTAAAGACCCTCCCCGCATATGCTATCTGTACATCACCTATAACTTGTTATTTAGCATTAAATGACTTTATTATTATTAATAGCTTAAGAGAGCTACAGTGAGAATTAAGAATGATTGGAAAAGTTTGTGAGTAGTGAACAAACAACACCCTTGGATGTATAGTACTAAAATAATCATCTTTGCTTTATCCTAGGATGAGGAAAAGTATTAAATTTCTTATTATTATAGCATAGCTTTTAATGTCTTATGTTATTGTTATTGTTGTTGTTATTTACTATTACTATTTTAATCATTATTGTATCATCAAATCATAATCTTTATGATTATTATTATTATCAGTAACATTATCATTTAATTGTCA

Network for GWHGAAEX007985

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00173.27	Cyt-b5	150	221	1.80E-22

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00326	E1.6.2.2	Amino sugar and nucleotide sugar metabolism	map00520

Gene Ontology

GO term	Ontology	Name
GO:0020037	Molecular Function	heme binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	27.500
SRP064423	SRR2545915	Juvenile tuber	31.120
SRP108465	SRR5643513	five period of Gastrodia elata	35.680
	SRR5643514	five period of Gastrodia elata	40.040
	SRR5643515	five period of Gastrodia elata	39.470
	SRR5643524	five period of Gastrodia elata	41.130
	SRR5643525	five period of Gastrodia elata	33.420
	SRR5643528	five period of Gastrodia elata	43.120
	SRR5643658	five period of Gastrodia elata	35.500
	SRR5643659	five period of Gastrodia elata	31.320
	SRR5643660	five period of Gastrodia elata	29.820
	SRR5643661	five period of Gastrodia elata	28.090
	SRR5643662	five period of Gastrodia elata	28.780
	SRR5643663	five period of Gastrodia elata	32.140
	SRR5643664	five period of Gastrodia elata	27.460
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	24.800
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	33.580
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	30.020
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	30.470
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.010
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	26.220
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	27.460
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	26.900
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	28.430
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	28.210
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	39.290
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	39.290
SRP279888	Gastro	Gastrodia elata tuber	32.01
	Juven	Juvenile tuber	33.75
	Mother_Gastro	Mother tuber of Gastrodia elata	109.19
	Mother_Juven	Mother tuber of Juvenile	82.85