Detail information of GWHGAAEX007990/evm.TU.scaffold_209.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|323356887|ref|YP_004223283.1|9.00E-31serine/threonine protein kinase [Microbacterium testaceum StLB037]
KOGKOG059203-phosphoinositide-dependent protein kinase (PDK1)
nrgi|743762946|ref|XP_010910642.1|0PREDICTED: 3-phosphoinositide-dependent protein kinase 2-like [Elaeis guineensis]
Swissprottr|Q9XF67|PDPK1_ARATH03-phosphoinositide-dependent protein kinase 1
trEMBLtr|M0RH25|M0RH25_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P10490_001}
TAIRAT5G0451003'-phosphoinositide-dependent protein kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000002079887581025620-
Transcript Sequence

Network for GWHGAAEX007990

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase543044.50E-62
PF14593.5PH_33974981.30E-24
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyAGC_PDK1

KEGG pathway

KO Enzyme pathway mapID
K06276PDPK1 MAPK signaling pathway - yeast map04011
FoxO signaling pathwaymap04068
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Apoptosismap04210
Focal adhesionmap04510
T cell receptor signaling pathwaymap04660
Fc epsilon RI signaling pathwaymap04664
Insulin signaling pathwaymap04910
PPAR signaling pathwaymap03320
Thyroid hormone signaling pathwaymap04919
Aldosterone-regulated sodium reabsorptionmap04960
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.410
SRR2545915Juvenile tuber21.350
SRP108465SRR5643513five period of Gastrodia elata13.290
SRR5643514five period of Gastrodia elata15.930
SRR5643515five period of Gastrodia elata13.220
SRR5643524five period of Gastrodia elata15.970
SRR5643525five period of Gastrodia elata14.000
SRR5643528five period of Gastrodia elata16.730
SRR5643658five period of Gastrodia elata12.080
SRR5643659five period of Gastrodia elata11.960
SRR5643660five period of Gastrodia elata12.020
SRR5643661five period of Gastrodia elata11.840
SRR5643662five period of Gastrodia elata13.570
SRR5643663five period of Gastrodia elata12.530
SRR5643664five period of Gastrodia elata14.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.190
SRR6049655Rhizomagastrodiae_C368-T10_good_118.110
SRR6049656Rhizomagastrodiae_C368-T07_good_120.220
SRR6049657Rhizomagastrodiae_C368-T07_good_119.700
SRR6049658Rhizomagastrodiae_C368-T04_good_121.430
SRR6049659Rhizomagastrodiae_C368-T04_good_120.020
SRR6049660Rhizomagastrodiae_C368-T01_good_119.590
SRR6049661Rhizomagastrodiae_C368-T04_good_120.730
SRR6049662Rhizomagastrodiae_C368-T01_good_120.260
SRR6049663Rhizomagastrodiae_C368-T01_good_117.520
SRR6049664Rhizomagastrodiae_C368-T10_good_121.250
SRR6049665Rhizomagastrodiae_C368-T10_good_121.250
SRP279888GastroGastrodia elata tuber 26.73
JuvenJuvenile tuber30.14
Mother_GastroMother tuber of Gastrodia elata 18.20
Mother_JuvenMother tuber of Juvenile 30.35