Detail information of GWHGAAEX007995/evm.TU.scaffold_21.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672165020|ref|XP_008802404.1|1.93E-75PREDICTED: cyclin-dependent kinase inhibitor 5-like [Phoenix dactylifera]
Swissprottr|Q283L0|KRP5_ORYSJ2.00E-47Cyclin-dependent kinase inhibitor 5
trEMBLtr|M0RNU3|M0RNU3_MUSAM4.00E-63Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P02630_001}
TAIRAT5G488204.00E-44inhibitor/interactor with cyclin-dependent kinase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000229213895221+
Transcript Sequence

Network for GWHGAAEX007995

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02234.18CDI1481913.70E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007050Biological Processcell cycle arrest
GO:0004861Molecular Functioncyclin-dependent protein serine/threonine kinase inhibitor activity
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.230
SRR2545915Juvenile tuber10.260
SRP108465SRR5643513five period of Gastrodia elata11.790
SRR5643514five period of Gastrodia elata11.060
SRR5643515five period of Gastrodia elata9.270
SRR5643524five period of Gastrodia elata9.310
SRR5643525five period of Gastrodia elata10.060
SRR5643528five period of Gastrodia elata8.510
SRR5643658five period of Gastrodia elata8.620
SRR5643659five period of Gastrodia elata10.250
SRR5643660five period of Gastrodia elata11.730
SRR5643661five period of Gastrodia elata11.030
SRR5643662five period of Gastrodia elata12.560
SRR5643663five period of Gastrodia elata11.370
SRR5643664five period of Gastrodia elata18.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.670
SRR6049655Rhizomagastrodiae_C368-T10_good_123.220
SRR6049656Rhizomagastrodiae_C368-T07_good_119.630
SRR6049657Rhizomagastrodiae_C368-T07_good_113.950
SRR6049658Rhizomagastrodiae_C368-T04_good_18.740
SRR6049659Rhizomagastrodiae_C368-T04_good_17.770
SRR6049660Rhizomagastrodiae_C368-T01_good_112.860
SRR6049661Rhizomagastrodiae_C368-T04_good_114.410
SRR6049662Rhizomagastrodiae_C368-T01_good_122.350
SRR6049663Rhizomagastrodiae_C368-T01_good_112.610
SRR6049664Rhizomagastrodiae_C368-T10_good_116.660
SRR6049665Rhizomagastrodiae_C368-T10_good_116.660
SRP279888GastroGastrodia elata tuber 5.85
JuvenJuvenile tuber6.90
Mother_GastroMother tuber of Gastrodia elata 9.48
Mother_JuvenMother tuber of Juvenile 3.40