Gene detail

Detail information of GWHGAAEX007999/CADD00652.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000022	162905	165421	-

Transcript Sequence
>GWHTAAEX007999 CTGTAATTTAAATGGGTCGACCACTTGACCGCTCGAAAGTCTCATTTTTCACACTAGAGGAACTTGCGTAGAGACTGAGGGTTCGGAGGAGGCGAAGTAGTTAATGCGGAGCAGAAAGGAAAGAGAGGGTCGAAGCAAAGATAATCGACTCCACAAGGCAGAGGGATCGCAGGGCGCCAGTGCTGCGTAAATAGTTAAATGCGGCTGGGAGTCGGATTTATCAAATCGCAGATTTACCTCGACATATGATTTTACGCTGTCACGTAGGATTAGGGCGCCGTCAAACAGCTCCTAGTTCTTATTGAGAGGCAGTATGAAGCCTGACAAAAGGATTGGTTTCGTCTTCCAACTCTAACGCATCAGGCTATTCTTTTTTTTTTTTTTTCAAACTCTACGAAGGTACTTACTAGTCATAATCTAGAGCTGCACGCATTGATGCTGTTTTTCTATTCTGGTTCTCGAGAGTGGATGTGCGAGGGAAATAATTATTTGTGTTGGGAATTTTAATTAATCGTGTTCCTTCTGAAGTTTTTATAGCCATTTTCTTTCGGGAATCGAAATGGTTTTCGTCCAATATTTATCAATTTTGGTTTGAGCGAGTTATTACAGTGCCTTTCTCTTGCGTTAGTGGCGTCATCAAGTTGCATGGTAGGCGGGTGAAGATGAAAAACTATTTTTTGCGGAAGACATGAACAAGTATGAGGCACTTTTTGTGTTTTATTCAGCAAGAACAATTGGGAAGCTTGATATCATTTTTGGAAATATATAGTATTCGTTGTGGTTTTGGGAAACGAGATAAATGTTTTTATTGCTTATATATTGGTATAAAAATGTGAGAACTATGGCTGTTAGGGTACTAATGAGAACACATTCTTCAAAAAGAACATACAAAAGAACTCAGTTTTTCACATATAATCTAAATCTTGTTCAGTCACATAAACAGACAATAGTATCTTCATTTACGTTTAGAAAAAAAAGGGCAAAGATATCCCAGCCCTTTTTTTTTGGTTAGGATGACATTCAAAGACCTTGAATTTACTTTGAAATTAGTGCAAGACTCAACCCAAGGGCTAACAAAAGCTCATATTTTAAAACAAACCCAAGTCCATCATAACAGCAATATTCTGTTTATAAAACACTCAGATATAAACAATGTAACAATATTCCAACCCATATTTTCACTTTCATTAAATTCTCAATTTTTTGATTGCGGCATTTACTAATACACCCACTTTGATGCTTTGTTTTAAATCTATGTTGTAAATCTTGTAAACAAGGAATATTTTATCTGCATGTGTATAGATCCCTTAAAAAAGTAACTTTGAAGTATTGCATGCCACAGAGACACTGTTAATATCTAGCATATTTTGTATAATAATTGAATGGTTTAGCAAGACAATCAACTTGGTTCTTAAAACCAAATAAGAAACATATGAAATATGCAAATGTTGTCTTTTGGAACTAATAATACTTTTTTATTGATTTGCTGTCTGATTTTTTGTGTACATTGGGCTGTTTGATTCGCCAACATCTTGATGCAGTGCTATTATGTAGTGTTAATGGAGATTGAAACCATTTCTTAGCTGCAATGTTATCTCTAACTTTGAAATAACTACAAAAATACCACTGTTTAGTCATATATATAGATGCTTACTCAAAACATTGGGCATCTAGATGTAAGTGCTTAAAATTCGTTGCAAAATAGGGGTGGCTAGCCTAGTATGCCGACCGATCACAATGAGGTCTCCGGCCCCTGGCGAATCTGCTGGCCACTGCTATAAAGTCTTTCTCAAAATGTGGGGTGAGCTTTATAATGCACGATAAAACCTAACCGGTGTATTCTTTGAAATTTGATAAAAAGATAGATAGTTGTTAAAGAAGTTATTTTGCACCTAAAAGAAATCACACCAAATACAAAAGCATTCAACCAGGCAAACAATGACGTCCTCATAATACTAGCATCCAAATAACATGACATCTCAATAACAATGCATCTTAATAGCATCAAGATGTCCACTAACCAAACTAGTCAGTCTCTTTTTTTTGCTACATCTTGGAATGTGTAAATGATGGCTATTTTGTATATTCTAAATTAAAGTAACATTTTTGGTAATTAATTTATACATGCAATGCTCTTAGAATAAAATTTAATTGATGTTATTCCCAGAGGACCACTTTAAGGACATTTGTTATTGTTTGCTTCTTTACTCTATTGTTTGGGTTCATCCTTTCTAATGACTTTGCTATTTAAATACGGTAAGTTAAAAGAATATTTACTTTTTGTAACTATGTTCTTTACTTTCTTTTGATCCTAATTTGCTTATAGAGCTTGTCATGCACTCTAAAGTACTTGTCTTTGTTACTTTGGTTACTTTATCTTTTATCTTGTGCATCTTCAAAAGTATGTTTGGATCTAAATAATTTTGGGAAGTTGTTCAAGATGTTTTTAATGCTTTATATTTGTTTTTATTATTGATTGCATTCTATTGAGATTATAATGTATGGCTTTTGCATACC

Network for GWHGAAEX007999

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	28.190
SRP064423	SRR2545915	Juvenile tuber	29.270
SRP108465	SRR5643513	five period of Gastrodia elata	3.480
	SRR5643514	five period of Gastrodia elata	2.900
	SRR5643515	five period of Gastrodia elata	3.840
	SRR5643524	five period of Gastrodia elata	2.590
	SRR5643525	five period of Gastrodia elata	6.990
	SRR5643528	five period of Gastrodia elata	3.600
	SRR5643658	five period of Gastrodia elata	5.960
	SRR5643659	five period of Gastrodia elata	5.360
	SRR5643660	five period of Gastrodia elata	9.120
	SRR5643661	five period of Gastrodia elata	5.070
	SRR5643662	five period of Gastrodia elata	5.090
	SRR5643663	five period of Gastrodia elata	7.160
	SRR5643664	five period of Gastrodia elata	7.290
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.590
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.230
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.410
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.020
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.920
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.160
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.300
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.790
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.590
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.140
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.140
SRP279888	Gastro	Gastrodia elata tuber	3.84
	Juven	Juvenile tuber	4.29
	Mother_Gastro	Mother tuber of Gastrodia elata	2.53
	Mother_Juven	Mother tuber of Juvenile	4.24