Detail information of GWHGAAEX008007/evm.TU.scaffold_21.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42624.00E-95Uncharacterized conserved protein
nrgi|695057293|ref|XP_009416912.1|4.00E-162PREDICTED: integrator complex subunit 3 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0TYM8|M0TYM8_MUSAM2.00E-139Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P08690_001}
TAIRAT4G145904.00E-95embryo defective 2739

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000022573480574869-
Transcript Sequence

Network for GWHGAAEX008007

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10189.8Ints31183414.10E-86
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms46.060
SRR2545915Juvenile tuber45.650
SRP108465SRR5643513five period of Gastrodia elata39.400
SRR5643514five period of Gastrodia elata28.380
SRR5643515five period of Gastrodia elata52.130
SRR5643524five period of Gastrodia elata30.330
SRR5643525five period of Gastrodia elata73.180
SRR5643528five period of Gastrodia elata75.230
SRR5643658five period of Gastrodia elata90.310
SRR5643659five period of Gastrodia elata42.140
SRR5643660five period of Gastrodia elata33.210
SRR5643661five period of Gastrodia elata34.530
SRR5643662five period of Gastrodia elata48.430
SRR5643663five period of Gastrodia elata37.370
SRR5643664five period of Gastrodia elata82.920
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.970
SRR6049655Rhizomagastrodiae_C368-T10_good_122.230
SRR6049656Rhizomagastrodiae_C368-T07_good_117.450
SRR6049657Rhizomagastrodiae_C368-T07_good_133.240
SRR6049658Rhizomagastrodiae_C368-T04_good_11.440
SRR6049659Rhizomagastrodiae_C368-T04_good_11.190
SRR6049660Rhizomagastrodiae_C368-T01_good_117.900
SRR6049661Rhizomagastrodiae_C368-T04_good_11.160
SRR6049662Rhizomagastrodiae_C368-T01_good_16.200
SRR6049663Rhizomagastrodiae_C368-T01_good_11.770
SRR6049664Rhizomagastrodiae_C368-T10_good_126.540
SRR6049665Rhizomagastrodiae_C368-T10_good_126.540
SRP279888GastroGastrodia elata tuber 16.30
JuvenJuvenile tuber32.95
Mother_GastroMother tuber of Gastrodia elata 60.71
Mother_JuvenMother tuber of Juvenile 30.89