Detail information of GWHGAAEX008008/evm.TU.scaffold_21.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|53804972|ref|YP_113172.1|8.00E-30hypothetical protein MCA0659 [Methylococcus capsulatus str. Bath]
nrgi|672181331|ref|XP_008810881.1|2.52E-55PREDICTED: uncharacterized protein LOC103722189 [Phoenix dactylifera]
trEMBLtr|I1IBN2|I1IBN2_BRADI2.00E-55Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI3G48940.1}
TAIRAT4G103001.00E-43RmlC-like cupins superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000022575683576251-
Transcript Sequence

Network for GWHGAAEX008008

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05899.11Cupin_3321051.90E-27
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.130
SRR2545915Juvenile tuber10.000
SRP108465SRR5643513five period of Gastrodia elata12.130
SRR5643514five period of Gastrodia elata3.810
SRR5643515five period of Gastrodia elata10.290
SRR5643524five period of Gastrodia elata4.690
SRR5643525five period of Gastrodia elata17.560
SRR5643528five period of Gastrodia elata26.650
SRR5643658five period of Gastrodia elata20.940
SRR5643659five period of Gastrodia elata3.390
SRR5643660five period of Gastrodia elata2.820
SRR5643661five period of Gastrodia elata6.150
SRR5643662five period of Gastrodia elata7.660
SRR5643663five period of Gastrodia elata6.800
SRR5643664five period of Gastrodia elata8.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.790
SRR6049655Rhizomagastrodiae_C368-T10_good_18.310
SRR6049656Rhizomagastrodiae_C368-T07_good_16.100
SRR6049657Rhizomagastrodiae_C368-T07_good_16.940
SRR6049658Rhizomagastrodiae_C368-T04_good_13.100
SRR6049659Rhizomagastrodiae_C368-T04_good_19.720
SRR6049660Rhizomagastrodiae_C368-T01_good_17.770
SRR6049661Rhizomagastrodiae_C368-T04_good_18.410
SRR6049662Rhizomagastrodiae_C368-T01_good_14.010
SRR6049663Rhizomagastrodiae_C368-T01_good_13.320
SRR6049664Rhizomagastrodiae_C368-T10_good_19.800
SRR6049665Rhizomagastrodiae_C368-T10_good_19.800
SRP279888GastroGastrodia elata tuber 11.32
JuvenJuvenile tuber4.24
Mother_GastroMother tuber of Gastrodia elata 47.72
Mother_JuvenMother tuber of Juvenile 28.96