Detail information of GWHGAAEX008009/evm.TU.scaffold_21.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21760Exocyst complex, subunit SEC15
nrgi|743824812|ref|XP_010932875.1|0PREDICTED: exocyst complex component SEC15A-like [Elaeis guineensis]
Swissprottr|Q9LXX6|SC15A_ARATH0Exocyst complex component SEC15A
trEMBLtr|M0U545|M0U545_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP00330_001}
TAIRAT3G566400exocyst complex component sec15A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000022596336599919-
Transcript Sequence

Network for GWHGAAEX008009

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04091.11Sec154617728.40E-71
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006904Biological Processvesicle docking involved in exocytosis
GO:0000145Cellular Componentexocyst

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.940
SRR2545915Juvenile tuber26.640
SRP108465SRR5643513five period of Gastrodia elata29.020
SRR5643514five period of Gastrodia elata28.930
SRR5643515five period of Gastrodia elata28.550
SRR5643524five period of Gastrodia elata28.980
SRR5643525five period of Gastrodia elata17.080
SRR5643528five period of Gastrodia elata16.790
SRR5643658five period of Gastrodia elata23.330
SRR5643659five period of Gastrodia elata24.040
SRR5643660five period of Gastrodia elata26.790
SRR5643661five period of Gastrodia elata23.700
SRR5643662five period of Gastrodia elata24.640
SRR5643663five period of Gastrodia elata25.690
SRR5643664five period of Gastrodia elata21.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.510
SRR6049655Rhizomagastrodiae_C368-T10_good_122.460
SRR6049656Rhizomagastrodiae_C368-T07_good_120.590
SRR6049657Rhizomagastrodiae_C368-T07_good_121.070
SRR6049658Rhizomagastrodiae_C368-T04_good_116.130
SRR6049659Rhizomagastrodiae_C368-T04_good_116.030
SRR6049660Rhizomagastrodiae_C368-T01_good_117.300
SRR6049661Rhizomagastrodiae_C368-T04_good_117.120
SRR6049662Rhizomagastrodiae_C368-T01_good_120.130
SRR6049663Rhizomagastrodiae_C368-T01_good_119.760
SRR6049664Rhizomagastrodiae_C368-T10_good_127.790
SRR6049665Rhizomagastrodiae_C368-T10_good_127.790
SRP279888GastroGastrodia elata tuber 24.34
JuvenJuvenile tuber33.46
Mother_GastroMother tuber of Gastrodia elata 29.22
Mother_JuvenMother tuber of Juvenile 25.85