Detail information of GWHGAAEX008016/evm.TU.scaffold_21.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108802877|ref|YP_642814.1|2.00E-26serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|225428322|ref|XP_002282994.1|0PREDICTED: calcium-dependent protein kinase 26 isoform X2 [Vitis vinifera]
Swissprottr|A5A7I7|CDPK4_SOLTU0Calcium-dependent protein kinase 4
trEMBLtr|F6I0Q9|F6I0Q9_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB60525.1}
TAIRAT2G172900Calcium-dependent protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000022721897731056+
Transcript Sequence

Network for GWHGAAEX008016

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase783352.60E-71
PF13499.5EF-hand_73834426.70E-10
PF13499.5EF-hand_74545141.00E-12
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.470
SRR2545915Juvenile tuber25.280
SRP108465SRR5643513five period of Gastrodia elata24.600
SRR5643514five period of Gastrodia elata22.580
SRR5643515five period of Gastrodia elata29.180
SRR5643524five period of Gastrodia elata21.030
SRR5643525five period of Gastrodia elata30.940
SRR5643528five period of Gastrodia elata27.110
SRR5643658five period of Gastrodia elata24.500
SRR5643659five period of Gastrodia elata27.410
SRR5643660five period of Gastrodia elata27.420
SRR5643661five period of Gastrodia elata27.890
SRR5643662five period of Gastrodia elata30.970
SRR5643663five period of Gastrodia elata26.310
SRR5643664five period of Gastrodia elata25.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.760
SRR6049655Rhizomagastrodiae_C368-T10_good_115.700
SRR6049656Rhizomagastrodiae_C368-T07_good_127.740
SRR6049657Rhizomagastrodiae_C368-T07_good_128.860
SRR6049658Rhizomagastrodiae_C368-T04_good_128.990
SRR6049659Rhizomagastrodiae_C368-T04_good_132.760
SRR6049660Rhizomagastrodiae_C368-T01_good_127.990
SRR6049661Rhizomagastrodiae_C368-T04_good_130.860
SRR6049662Rhizomagastrodiae_C368-T01_good_124.610
SRR6049663Rhizomagastrodiae_C368-T01_good_128.020
SRR6049664Rhizomagastrodiae_C368-T10_good_124.310
SRR6049665Rhizomagastrodiae_C368-T10_good_124.310
SRP279888GastroGastrodia elata tuber 27.17
JuvenJuvenile tuber22.70
Mother_GastroMother tuber of Gastrodia elata 26.71
Mother_JuvenMother tuber of Juvenile 24.82