Detail information of GWHGAAEX008021/evm.TU.scaffold_21.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|187735234|ref|YP_001877346.1|3.00E-52GTP-binding protein Obg/CgtA [Akkermansia muciniphila ATCC BAA-835]
KOGKOG14893.00E-102Predicted GTP-binding protein (ODN superfamily)
nrgi|719991131|ref|XP_010253176.1|3.71E-130PREDICTED: probable GTP-binding protein OBGM, mitochondrial isoform X2 [Nelumbo nucifera]
Swissprottr|Q2QZ37|OBGM_ORYSJ3.00E-119Probable GTP-binding protein OBGM, mitochondrial (Precursor)
trEMBLtr|M0WTZ5|M0WTZ5_HORVD1.00E-118Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_54651.4} (Fragment)
TAIRAT1G07620_23.00E-102Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000022838888840015+
Transcript Sequence

Network for GWHGAAEX008021

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01926.22MMR_HSR11883151.00E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.050
SRR2545915Juvenile tuber13.340
SRP108465SRR5643513five period of Gastrodia elata19.020
SRR5643514five period of Gastrodia elata18.410
SRR5643515five period of Gastrodia elata17.940
SRR5643524five period of Gastrodia elata19.820
SRR5643525five period of Gastrodia elata19.500
SRR5643528five period of Gastrodia elata14.060
SRR5643658five period of Gastrodia elata17.830
SRR5643659five period of Gastrodia elata18.050
SRR5643660five period of Gastrodia elata18.860
SRR5643661five period of Gastrodia elata17.230
SRR5643662five period of Gastrodia elata20.760
SRR5643663five period of Gastrodia elata19.440
SRR5643664five period of Gastrodia elata13.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.130
SRR6049655Rhizomagastrodiae_C368-T10_good_119.560
SRR6049656Rhizomagastrodiae_C368-T07_good_115.160
SRR6049657Rhizomagastrodiae_C368-T07_good_124.390
SRR6049658Rhizomagastrodiae_C368-T04_good_120.640
SRR6049659Rhizomagastrodiae_C368-T04_good_124.340
SRR6049660Rhizomagastrodiae_C368-T01_good_115.410
SRR6049661Rhizomagastrodiae_C368-T04_good_117.750
SRR6049662Rhizomagastrodiae_C368-T01_good_115.750
SRR6049663Rhizomagastrodiae_C368-T01_good_116.250
SRR6049664Rhizomagastrodiae_C368-T10_good_111.010
SRR6049665Rhizomagastrodiae_C368-T10_good_111.010
SRP279888GastroGastrodia elata tuber 24.42
JuvenJuvenile tuber34.37
Mother_GastroMother tuber of Gastrodia elata 33.99
Mother_JuvenMother tuber of Juvenile 41.00