Detail information of GWHGAAEX008023/evm.TU.scaffold_21.35_evm.TU.scaffold_21.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG27225.00E-148Predicted membrane protein
nrgi|115480587|ref|NP_001063887.1|1.56E-177Os09g0554300 [Oryza sativa Japonica Group]
trEMBLtr|I1QR51|I1QR51_ORYGL3.00E-178Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA09G0153000.1}
TAIRAT5G659805.00E-148Auxin efflux carrier family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000022849815853235+
Transcript Sequence

Network for GWHGAAEX008023

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03547.17Mem_trans104063.90E-70
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms50.230
SRR2545915Juvenile tuber7.180
SRP108465SRR5643513five period of Gastrodia elata92.660
SRR5643514five period of Gastrodia elata134.280
SRR5643515five period of Gastrodia elata94.380
SRR5643524five period of Gastrodia elata104.720
SRR5643525five period of Gastrodia elata101.930
SRR5643528five period of Gastrodia elata192.590
SRR5643658five period of Gastrodia elata113.610
SRR5643659five period of Gastrodia elata2.600
SRR5643660five period of Gastrodia elata3.400
SRR5643661five period of Gastrodia elata2.430
SRR5643662five period of Gastrodia elata16.850
SRR5643663five period of Gastrodia elata9.430
SRR5643664five period of Gastrodia elata8.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_163.890
SRR6049655Rhizomagastrodiae_C368-T10_good_153.510
SRR6049656Rhizomagastrodiae_C368-T07_good_153.460
SRR6049657Rhizomagastrodiae_C368-T07_good_174.020
SRR6049658Rhizomagastrodiae_C368-T04_good_1120.470
SRR6049659Rhizomagastrodiae_C368-T04_good_1164.670
SRR6049660Rhizomagastrodiae_C368-T01_good_182.540
SRR6049661Rhizomagastrodiae_C368-T04_good_1105.390
SRR6049662Rhizomagastrodiae_C368-T01_good_192.100
SRR6049663Rhizomagastrodiae_C368-T01_good_1176.690
SRR6049664Rhizomagastrodiae_C368-T10_good_152.820
SRR6049665Rhizomagastrodiae_C368-T10_good_152.820
SRP279888GastroGastrodia elata tuber 50.73
JuvenJuvenile tuber22.00
Mother_GastroMother tuber of Gastrodia elata 753.61
Mother_JuvenMother tuber of Juvenile 271.22